Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02629 ATGCACGGTCGCCCTCGCAAAGCTCCGAAACCAGAAGATGCGGCGGCTCTGTCAGCCAAAGCTGAAAAGCTGCGTTCGCTTCAATCTCAGTTCCTCGCCAATCACCACTATCGCATATATACTAAGGAAGCTCTAGAGATAAGCGCCAAGCTTCTTGAGATCAATCCAGAATCGTACACAGCTTGGAATTACAGAAAGCTCGCCGTCGAACACTTTCTTTCCCAGTCTCATTCTGATCTTGATTCTGTCAAATCCATTTTCGATGAAGAGCTCAAAGTGGTAGAGAATGCATTGAGGCAGAACTTTAAGTCATATGGAGCATGGCATCATAGGAAATGGGTGCTAAGCAAGGAATATTCATCCATAGATAAGGAGTTGCGCCTTCTGGAACGTTTCCAGAAGGCTGATCCTCGAAATTTCCATGCATGGAACTACCGGAGGTTTGTTGCTGAACTGTTGAAAAGATCAGATGAGGACGAATTGAAATACACAGAAGATGTGATAGGGGCAAATTTTAGCAATTACTCTGCTTGGCACAATCGTAGCATACTTCTATCCAAGTTACTACGGGAAAGGAGAGAAGGATATTGCCCTAAAGAGAAGGCTTTAAGTGAGGAGTATGAGCATGTCCACAATGCTCTTTTTACTGACCCAGATGATCAGAGTGGTTGGTTTTATCATCTTTGGCTTCTTGATCAAACAACGAAAACTGATGCTCCTGTACTTGTTTCATCTTGGCCTCCCTGTGGATCTAATATCACTCTGCAGGGAAATAAGTGCCTGCATGGTTGTGGTATCTCTCTGTTAAGTAGTGAACTGTCAGACACAAGAACACTTCCtatcattctttatttcaatcaAGCCGTTGAAGGCATTAGTTCATCTACAGTAGTTGTTGAATCTGAACTTAGTATAACAGGGGATTTTGTTTGGAAACCACTCTCAACAAACAACTCGAAGACTGCTCAATGTTGGGTTACATATCTAAATCTCAGAAATATGGAGCTACATCCGTTGAAAACTTACCCTGTAGAGATCAGCCTTGGACATTCTCAGGGTATTGTATCTTCAAGTGGTTGTCATTATGGCCATCCTTCCAAAATAGCCTTTAAGTTGTGTGTACAGACAGCCTACACAGAACCTGCTGAAGGACAGGCTGCAAAAAGGACTTTTTGGAgggatgaaaattttcaaaagtttgaGCATTGCCAGGAATCAGATTCCAATCTTTCAGTTGACGAACTAATTACTGAGAACGACCTCACTCCAACAACTTCCAATTGGTGTGCCGAGATTATTGCTAATGAAATAACTGTTTTCCGAGAATTGTTGTCTTTGACTGACTGTAAAATTGGAAAGCTTACACTCGCAAGACTGTTGACCGCTGATGATTTAATATCATTTCCACGTGCTAAAAGCATGGTTCATGCGGAAGAAGTCCTTGAACTTTACACTGATCTGGTGAAGTTGGATCCAACGCATTCCATATACTACAAGGATGAACGTAGCTTAACACTGCTTCGGCAGATAACCTCAACTAGGACTTCCTTAGTGACATACTGTCGCAACTTTAGAGATGCAACAGAGAGCGTTGCTGGTTACATCTGTCTACGATTACAGAACCTATCATTATCACGGATGGGATCCATTGAGAATTTATTGTGGGTGCAAATGCTAGATCTCAGCCACAATGAACTTCGATCAATTGAAGGATTGGAAGCTATGCAACTTCTCTCTTGCTTAAATTTGAGTCAGAATAAGTTTGGTAGTTTTACTGCTCTGGCTCCTCTCAGGTTGATTAAATCGCTAAAAGTGCTGAATATTTCTTATAACGAGATAGGTTCACACTCCATAGACACAAGAAGATACCTATGTGCTTCTCCTTTGTGTCATGCTGAAGAATTTCCCTGGGACCGGTTCAAAATCTTAACTGGCAGTGTCAATGTCACAGATTTTTGGGAAGCTTTCCTAGTTTTTGAAAGCTTGAACTTAACGCAGTTAGACATAACAGGAAATACAATTGCCGATGAAAGCTTCAGATCATTTCTTGTCAAAGCTTTGCCTGCGCTGAAGTGGCTGGATGGTGAAGAATTACCCTA 2099 0.4121 MHGRPRKAPKPEDAAALSAKAEKLRSLQSQFLANHHYRIYTKEALEISAKLLEINPESYTAWNYRKLAVEHFLSQSHSDLDSVKSIFDEELKVVENALRQNFKSYGAWHHRKWVLSKEYSSIDKELRLLERFQKADPRNFHAWNYRRFVAELLKRSDEDELKYTEDVIGANFSNYSAWHNRSILLSKLLRERREGYCPKEKALSEEYEHVHNALFTDPDDQSGWFYHLWLLDQTTKTDAPVLVSSWPPCGSNITLQGNKCLHGCGISLLSSELSDTRTLPIILYFNQAVEGISSSTVVVESELSITGDFVWKPLSTNNSKTAQCWVTYLNLRNMELHPLKTYPVEISLGHSQGIVSSSGCHYGHPSKIAFKLCVQTAYTEPAEGQAAKRTFWRDENFQKFEHCQESDSNLSVDELITENDLTPTTSNWCAEIIANEITVFRELLSLTDCKIGKLTLARLLTADDLISFPRAKSMVHAEEVLELYTDLVKLDPTHSIYYKDERSLTLLRQITSTRTSLVTYCRNFRDATESVAGYICLRLQNLSLSRMGSIENLLWVQMLDLSHNELRSIEGLEAMQLLSCLNLSQNKFGSFTALAPLRLIKSLKVLNISYNEIGSHSIDTRRYLCASPLCHAEEFPWDRFKILTGSVNVTDFWEAFLVFESLNLTQLDITGNTIADESFRSFLVKALPALKWLDGEELP 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02629 699 Gene3D Ribonuclease Inhibitor 526 699 IPR032675 -
Bva06g02629 699 Gene3D Protein prenylyltransferase 1 246 - -
Bva06g02629 699 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 1 608 - -
Bva06g02629 699 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 156 190 IPR002088 GO:0008318|GO:0018342
Bva06g02629 699 SUPERFAMILY Protein prenylyltransferase 2 501 - -
Bva06g02629 699 PANTHER - 1 608 - -
Bva06g02629 699 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 86 120 IPR002088 GO:0008318|GO:0018342
Bva06g02629 699 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 121 155 IPR002088 GO:0008318|GO:0018342
Bva06g02629 699 Pfam Protein prenyltransferase alpha subunit repeat 42 71 IPR002088 GO:0008318|GO:0018342
Bva06g02629 699 Pfam Protein prenyltransferase alpha subunit repeat 123 151 IPR002088 GO:0008318|GO:0018342
Bva06g02629 699 Pfam Protein prenyltransferase alpha subunit repeat 204 233 IPR002088 GO:0008318|GO:0018342
Bva06g02629 699 Pfam Protein prenyltransferase alpha subunit repeat 88 117 IPR002088 GO:0008318|GO:0018342
Bva06g02629 699 Pfam Protein prenyltransferase alpha subunit repeat 158 187 IPR002088 GO:0008318|GO:0018342
Bva06g02629 699 ProSiteProfiles Leucine-rich repeat profile. 555 576 IPR001611 GO:0005515
Bva06g02629 699 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 202 236 IPR002088 GO:0008318|GO:0018342
Bva06g02629 699 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 40 74 IPR002088 GO:0008318|GO:0018342
Bva06g02629 699 SUPERFAMILY L domain-like 533 697 - -
Bva06g02629 699 Pfam Leucine Rich repeat 662 677 IPR001611 GO:0005515
Bva06g02629 699 Pfam Leucine Rich repeat 602 614 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02629 Bva-Chr6 16663130 16667711 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02629 K14050 - gmx:100807900 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02629 06 16663130 16667711 Bva06g02629 06 16663130 16667711 ECH