Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02628 ATGGAGAAGGAGAATGATTTCATGGTGCACGATATTCTACTACAAATTGGTCTGATCCTTCTGATGGTAGTCATGTTCCTGTTTATGCACGATATTCCCAAGAAGTTATATGCCAAACTCCGCCTCAGAAACCGAGCGGATATTCAAGCAAAGCGCCACTTCGTTCAAGGCGCTCAGCTCCTCGCTCGAGCCAGATCCTCTAAGACTCGCTCCAACGCCAACTCATTGGCCAAGGAAGCCGAAGCAGAAGCCGAAAAAGCGATCGCGCTTGATCGCAAGGATGCAGCCGCTTACCTTCTCAAAGCCTTAACCCTTGATCTCCAAGGGTTCAGAACATCCGCTCTTGACTCGCTCGACGTGGCTGTGTCCCCGCTGGCAGTGAAGTCGTTGACCGATAAGGAGAGAGGAGATGCCTTCTTCAAGAGGGCTGAGTTGAAGATGGCGATGAATCCGCGTAGTCAAGTTGACTCGGCACTTGCGGATTTGACTGAGGCTTTGAAGTTGAGTTCGGATAATGCCAAAGCTCACTGTCTTTTGGGGGAGTGCTATGAAGTAAAGAAGATGATAGTTGAAGCGAAGAAAGCCTACGAGGATGCTCTGAAGGTGGAACCTCACTTGGATGCGGCTCGAGAGGCATTGAACAGGTTGGATTCATA 656 0.4985 MEKENDFMVHDILLQIGLILLMVVMFLFMHDIPKKLYAKLRLRNRADIQAKRHFVQGAQLLARARSSKTRSNANSLAKEAEAEAEKAIALDRKDAAAYLLKALTLDLQGFRTSALDSLDVAVSPLAVKSLTDKERGDAFFKRAELKMAMNPRSQVDSALADLTEALKLSSDNAKAHCLLGECYEVKKMIVEAKKAYEDALKVEPHLDAAREALNRLDS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02628 218 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 10 215 - -
Bva06g02628 218 SUPERFAMILY TPR-like 78 212 IPR011990 GO:0005515
Bva06g02628 218 Gene3D Tetratricopeptide repeat domain 67 216 IPR011990 GO:0005515
Bva06g02628 218 Coils Coil 70 90 - -
Bva06g02628 218 PANTHER - 10 215 - -
Bva06g02628 218 SMART tpr_5 173 206 IPR019734 GO:0005515
Bva06g02628 218 SMART tpr_5 136 172 IPR019734 GO:0005515
Bva06g02628 218 ProSiteProfiles TPR repeat profile. 173 206 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02628 Bva-Chr6 16661786 16662792 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02628 - - tcc:18591820 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02628 06 16661786 16662792 Bva06g02628 06 16661786 16662792 ECH