Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02621 ATGGCGACCTTTGAATTGTACCGAAGGTCGACGATTGGAATGTGCCTCACGGAGACTTTGGATGAAATGGTTCAGAATGGTGCTCTCAGCCCCGAGCTTGCTATTCAGGTTCTTGTTCAGTTCGATAAGTCCATGACTGAAGCTCTGGAAACGCAAGTTAAGAGCAAGGTTTCTATCAagGGACATCTACATACATACAGATTCTGCGACAATGTTTGGACCTTCATTTTACAAGATGCTATTTTGAAGACTGAAGACTGCCAAGAAAATGTTGGACAAGTTAAAATAGTCGCATGTGACTCAAAATTGTTGACGCAATA 320 0.4188 MATFELYRRSTIGMCLTETLDEMVQNGALSPELAIQVLVQFDKSMTEALETQVKSKVSIKGHLHTYRFCDNVWTFILQDAILKTEDCQENVGQVKIVACDSKLLTQ 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02621 106 Pfam Transcription initiation factor IIA, gamma subunit 60 101 IPR015871 GO:0005672|GO:0006367
Bva06g02621 106 CDD TFIIA_gamma_C 57 102 IPR015871 GO:0005672|GO:0006367
Bva06g02621 106 PIRSF TFIIA_gamma_hum 1 106 IPR003194 GO:0005672|GO:0006367
Bva06g02621 106 SUPERFAMILY Transcription factor IIA (TFIIA), beta-barrel domain 52 102 IPR009088 GO:0005672|GO:0006367
Bva06g02621 106 CDD TFIIA_gamma_N 4 51 IPR015872 GO:0005672|GO:0006367
Bva06g02621 106 Pfam Transcription initiation factor IIA, gamma subunit, helical domain 4 49 IPR015872 GO:0005672|GO:0006367
Bva06g02621 106 Gene3D - 3 54 IPR009083 GO:0005672|GO:0006367
Bva06g02621 106 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 1 106 IPR003194 GO:0005672|GO:0006367
Bva06g02621 106 Gene3D - 55 105 IPR009088 GO:0005672|GO:0006367
Bva06g02621 106 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 1 106 - -
Bva06g02621 106 SUPERFAMILY Transcription factor IIA (TFIIA), alpha-helical domain 4 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02621 Bva-Chr6 16564391 16567338 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02621 K03123 - gmx:100814623 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02621 06 16564391 16567338 Bva06g02621 06 16564391 16567338 ECH