Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02607 ATGGGTACTGGTTGGAGAAGAGCCTTTTGCACTCGTGACCCTGAATCTATAATATATGACAAGCAACAGAGAAGCCCAAATCCTAGTCCCAGCCCCAGAAGCTGTGTTAGATTGGGTTTTCTCACCGGTAGTAGCAACCCCTCCACTCCGCGCCTGCAGCAGCAACATCCAGCACCTGTCAACAGCCCAAGTTTGCGTTGCCGAACAGCTGCGGAAGCAGCTCAAACAGCGAATGACAGCCCCAGATTCCAAAACAAAACTACTCCCAGGGCAATCAAATCAATCTCGAAGCAAACCTCTCCGCGCTCCCCTTTGAAATTGTCTCTCTTCAAaaatagcttcaaattcaGGAGTAGCTGTGGCACATGTTTGAATAGCATGAAAACGGGTCAGGGTACGGCCATTTACACTGCAGAGTGTGCTCACGCTTTCCATTTCCCGTGTATCGCTGACTATGTACGCAAGCACGGTAGCCTTGTCTGCCCTGTCTGCAACACCACCTGGAAAGACGTACCACTACTCGCAGCGCACAAGAACCTCAGCGCAGAATTTGCAGAATCAAACGACGTCGTCGCTGAAAAGACCATGGAGAAACCAATTGCCAGAAACGAGAAAAAGGGACTAGAAAACTCGTCCCCTGTTTTCAAAACGAAGCACGTTGAAGAACAGCCGCAAATAAAGCATTCCGATTCAATCAGGTCCTACGATGATGACGAGCCTCTCCTTTCTCCAACCTCCGGTGGAAGAATCATTCCCATTCCCGAGGCTGTCGGAAACggtgaagaagaggaagacgATGTGGAAGAGTTCCAGGGCTTTTTCGTCAATCCAAAACCATCTTCAACCAAATCCTACTCTCATGATTTGCAAATAAACGATAGAGATTCCAGGAATATTCAGGTGAAGTTGATGCCCGAGTTTGCACTAGTATCAGTCTCTCAAACCCATGAGACTTATGCTCTGGCTATAAGAGTCAAGGCCCCTCCTCCGCCGCCAAAACGATGCGCTTGGAACAGCACTCATAATTCTAAGCCACTTCTGGACCCGTCACAGCGGGCACCCATAGATCTCGTTACTGTTCTTGATGTGAGTGGTAGCATGACCGGTGCTAAGATGCACATGCTAAAGCGCGCGATGCGTTTGATCATTTCCTCTCTTGGCTCAGCTGATAGGCTCTCCTTGGTGGCTTTCTCGGCTACACCTAAGCGGCTCCTCCCATTGAGAAGAATGACGCCTCAAGGTCAGCGAGTGGCTCGGCGAATTATTGACCGGCTTGTGTGTGGCCAAGGCACTTGTGTGGGTGATGCCTTGAGGAAAGCCACCAAAGTGCTTGAAGATCGTAGAGAAAGAAACCCTGTGGCAAGTGTCATGCTCTTATCGGACGGTCAAGATGAGAGAGTCCAAGTTAGTAATAACATCAATCAGCGGAAAACCACTAGCCACGCGTCTTCCACCCGATTCGCTCACATTGAAATTCCTGTTCATTCGTACGGGTTTGGACAGAAGAGTGGCTACAGTCATGAGCCGACTGAGGATGCATTTGCTAAGCGCGTAGGTGGTTTACTGAGTGTGGTGGTTCAGGACTTGAGAATTCAGCTTGGCTTTCAGTCCTCTTCGGCGCCGGCTGAAATTAGCGCAATCTACTCATTCAGTGGACGGCCCACGGCGCTGGGTTCTGGCTCCGTGCGGCTCGGTGATTTGTACGCCGACGAGGAGAGGGAGTTGCTTGTGGAGCTAAGGCTCCCTATCTCGGCTTTGGGTACCCACCACGTAATGACAGTACGGTGCCTTTATAAAGACCCTGCTAGCCAAGAGGTGGTATTCGGAAGGGAACAAGCACTTATTGTGCCGCCACCTCAGAGTGCTCGATCCTCCGGTAACGGTAACGGTAACGGTACCAGAACCGAAAGGTTGAGAAATCTGTTCATAACAACCAGAGCCATAGCAGAATCTCGTAGACTTTTAGAGCAGAACGATTTCACAAGCGCACATCATTTGCTTTCATCGACTCGAGCTCTTTTGATGCAGTCCAGTTCCATTTCTGCTGACGAGTACGTTCGAGGATTAGAGGCTGAGCTGGCAGAACTACATTGGCGGAGACAGCATCAGATGGAACAGCAGATGATGATGATCCAACGGAGGAGAGGGAACGATGAGGAGATGATTTTGGTGGATGAAAATGGTGAGCCGCTCCCGCCAACGTCGGCTTGGAGAGCAGCTGAGAAGCTCGCTAAGATGGCCATGATGAAGAAGTCATTGAATAAAGTCAGCGACTTGCACGGCTTCGAGAACGCCaggtttta 2303 0.4946 MGTGWRRAFCTRDPESIIYDKQQRSPNPSPSPRSCVRLGFLTGSSNPSTPRLQQQHPAPVNSPSLRCRTAAEAAQTANDSPRFQNKTTPRAIKSISKQTSPRSPLKLSLFKNSFKFRSSCGTCLNSMKTGQGTAIYTAECAHAFHFPCIADYVRKHGSLVCPVCNTTWKDVPLLAAHKNLSAEFAESNDVVAEKTMEKPIARNEKKGLENSSPVFKTKHVEEQPQIKHSDSIRSYDDDEPLLSPTSGGRIIPIPEAVGNGEEEEDDVEEFQGFFVNPKPSSTKSYSHDLQINDRDSRNIQVKLMPEFALVSVSQTHETYALAIRVKAPPPPPKRCAWNSTHNSKPLLDPSQRAPIDLVTVLDVSGSMTGAKMHMLKRAMRLIISSLGSADRLSLVAFSATPKRLLPLRRMTPQGQRVARRIIDRLVCGQGTCVGDALRKATKVLEDRRERNPVASVMLLSDGQDERVQVSNNINQRKTTSHASSTRFAHIEIPVHSYGFGQKSGYSHEPTEDAFAKRVGGLLSVVVQDLRIQLGFQSSSAPAEISAIYSFSGRPTALGSGSVRLGDLYADEERELLVELRLPISALGTHHVMTVRCLYKDPASQEVVFGREQALIVPPPQSARSSGNGNGNGTRTERLRNLFITTRAIAESRRLLEQNDFTSAHHLLSSTRALLMQSSSISADEYVRGLEAELAELHWRRQHQMEQQMMMIQRRRGNDEEMILVDENGEPLPPTSAWRAAEKLAKMAMMKKSLNKVSDLHGFENARF 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02607 767 Pfam von Willebrand factor type A domain 357 463 IPR002035 -
Bva06g02607 767 Pfam Ring finger domain 119 165 IPR001841 -
Bva06g02607 767 SMART ring_2 120 164 IPR001841 -
Bva06g02607 767 CDD RING-H2 120 165 - -
Bva06g02607 767 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 3 767 - -
Bva06g02607 767 ProSiteProfiles Zinc finger RING-type profile. 120 165 IPR001841 -
Bva06g02607 767 MobiDBLite consensus disorder prediction 20 98 - -
Bva06g02607 767 MobiDBLite consensus disorder prediction 219 238 - -
Bva06g02607 767 SMART VWA_4 354 539 IPR002035 -
Bva06g02607 767 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 767 - -
Bva06g02607 767 SUPERFAMILY RING/U-box 113 170 - -
Bva06g02607 767 SUPERFAMILY vWA-like 354 529 IPR036465 -
Bva06g02607 767 CDD vWA_C3HC4_type 355 526 - -
Bva06g02607 767 MobiDBLite consensus disorder prediction 219 237 - -
Bva06g02607 767 MobiDBLite consensus disorder prediction 16 98 - -
Bva06g02607 767 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 175 IPR013083 -
Bva06g02607 767 Gene3D von Willebrand factor, type A domain 356 537 IPR036465 -
Bva06g02607 767 ProSiteProfiles VWFA domain profile. 356 501 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02607 Bva-Chr6 16449432 16453159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02607 - - lja:Lj3g3v3131860.1 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02607 06 16449432 16453159 Bva06g02607 06 16449432 16453159 ECH