Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02591 ATGTCACTTCCGCTGACACCTTCTAAAAGGCCAAATGATAGGAGCCCTGCAGAGTCAAATGGGAGAGGGAAGTGGCAAAAGCTAGCAGGCGTTCATTCACCGAGTCAAGCCTTGAAAGTTTCTTCTGGGAGTGTTGTCTTCCGGTTGCTCTGTCATGCTTCTAAAATTGGTAGTGTTATTGGTAAAGGTGGCGCCACCATATCAGAAATTCGTCAGGAAACTGgagtaaaaattaaagttgaagATACAATTCCTGGATGCGATGAAAGATTTATCACTATTCAAGGTTCTGATAAAGAGACTGAAGATACTGATGAGAGCAAGGAGGTTTGCAAAGAAAACACAGATAACAATGAGAAGGGTGATGACACAGAAGATCATcatgataataataacaatgaaGATTCTATTCCTGTTgaagattcaaaatttgagAAGAGAACTTCATCTGTTCAGAAGGCTCTATTACTTATTTTTGAGAGGATAGTTAAAGGAGAAGAGGAGACAGCTGAAGGTGgtgatgaaaataataagccttcttcctttgttctgAGACTACTTGTCCTCTCTAGTCAAATTGGCTGCATCTTGGGAAAGGGCGGTAGTGTAATCAAGCAAATGTCAGCCGACAGTGGTGCGCAGATTCGGATTCTTCCTAGGGACAAACTTCCCCTGTGCGCATCATCTTCTGATGATTTGATTCAgATTACCGGGGGAGTTGAAGTTGTCAGGAAAGCTCTTCAATCTGTTTCGCAGCAGCTTTTGGAAAATCCACCTCGGGATCAAGAATCTCTACCTGTCAATCCCACAGGACTCTCTTCTCGTTCATTTGGTCCCAACCGTTCCTTTGCTGCCCAGGGAGGACCTTACACTGTGGCGTCTCGTGATATTTCTGATTTTCATTCTGCTCCTCATCCTCGGATTCCCAAACTTCATGAAGGTGCCATCCATGGTCGACATCAACCTTCACAGGAAATGCTTACTTttcgtttattttgtcatGCTGAGAGGGTAGGAAATATAATTGGTAAGGGTGGAGCAATTATAAAGATTATTCAGCAAGAGACAGCAAGTGAAATCAATGTTATTGAAGGAATTTCTGATCCAGAGGACCGTATTGTTGTCATATCTGGTCCAGCGCATCCGGATGATAGGATATCTCCCGTGCAAGATGCAGTACTCCGTGTGCAAACTAGAATTGTCAGGGCTATTCCCGATGCTAAAGAGCCCATGGTAGCAAGGATTATTGTTTCTTCCAATCAAATAGGTTGTCTCCTTGGCAAAGGTGGTTCCATCATTACTGAAATGAGAAAGTTATCTGGAGCATATATTCGTATATTAGGAAAGGATCAGGTTCCAAAGAGTGCttcagaagatgaagaagtaGTTCAGGTAAGTGGGGACTTTGAGGCTGTGCAGGATGCTCTATTGCAAATAACCACTAGACTACGGCATCATTTCTTTCGCGATGCATACCCTTCTATCAAATATCCTTCAAATTCTGCATTTCCGGATCAAGGTCCTCCTTTCCCGATGTACTTGGGAAGGAGGGAACTCTCACCTCCAGGAATGTATGCTAACCTAGGTCCTCAATTTCACAAGTTTGATGGTGTCAATGCTCCTTCTCCACATGGACATGGTCGTTTTCCTCATGATGATCATTCTCTATTTATGCATAATGTGCCTAGGCCACGTGTTCCTCCTCACATATCTGAAAGGAAACCTTGGGGTCCTCAGGGGCTAATTGAAGGTGGCGGACCCATGGGCTTTCCAGATTTTGCAGGAGGGCCTGCTAGAAGAATTTCAGGATTTGTTGGAGGGAGTCATCAACCAATTATCACAAGCACTACGATAGAAGTAGTCGTTCCTTGTACTGTAGTGCCTGAAATATATGGAGAAGATGGTGAATGCCTCAAACAAATACGTCAGATCTCTGATGCAAAAGTCACAATTACTGAGTCAAAGCCTGGAGCAGTGGAAACTACAATTATAATATCTGGAACTCCAGAGCAAACTCATGCCGCACAGAGTCTTATTCAGGCTTTTGTCATGTGTGAGAGGGAGTCTGGTTG 2072 0.4151 MSLPLTPSKRPNDRSPAESNGRGKWQKLAGVHSPSQALKVSSGSVVFRLLCHASKIGSVIGKGGATISEIRQETGVKIKVEDTIPGCDERFITIQGSDKETEDTDESKEVCKENTDNNEKGDDTEDHHDNNNNEDSIPVEDSKFEKRTSSVQKALLLIFERIVKGEEETAEGGDENNKPSSFVLRLLVLSSQIGCILGKGGSVIKQMSADSGAQIRILPRDKLPLCASSSDDLIQITGGVEVVRKALQSVSQQLLENPPRDQESLPVNPTGLSSRSFGPNRSFAAQGGPYTVASRDISDFHSAPHPRIPKLHEGAIHGRHQPSQEMLTFRLFCHAERVGNIIGKGGAIIKIIQQETASEINVIEGISDPEDRIVVISGPAHPDDRISPVQDAVLRVQTRIVRAIPDAKEPMVARIIVSSNQIGCLLGKGGSIITEMRKLSGAYIRILGKDQVPKSASEDEEVVQVSGDFEAVQDALLQITTRLRHHFFRDAYPSIKYPSNSAFPDQGPPFPMYLGRRELSPPGMYANLGPQFHKFDGVNAPSPHGHGRFPHDDHSLFMHNVPRPRVPPHISERKPWGPQGLIEGGGPMGFPDFAGGPARRISGFVGGSHQPIITSTTIEVVVPCTVVPEIYGEDGECLKQIRQISDAKVTITESKPGAVETTIIISGTPEQTHAAQSLIQAFVMCERESG 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02591 690 PANTHER KH DOMAIN-CONTAINING PROTEIN HEN4-LIKE 1 546 - -
Bva06g02591 690 CDD PCBP_like_KH 46 97 - -
Bva06g02591 690 CDD PCBP_like_KH 412 480 - -
Bva06g02591 690 ProSiteProfiles Type-1 KH domain profile. 181 250 - -
Bva06g02591 690 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 38 99 IPR036612 GO:0003723
Bva06g02591 690 MobiDBLite consensus disorder prediction 93 145 - -
Bva06g02591 690 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 173 258 IPR036612 GO:0003723
Bva06g02591 690 Gene3D K Homology domain, type 1 613 686 IPR036612 GO:0003723
Bva06g02591 690 ProSiteProfiles Type-1 KH domain profile. 410 479 - -
Bva06g02591 690 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 404 492 IPR036612 GO:0003723
Bva06g02591 690 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 1 546 - -
Bva06g02591 690 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 611 683 IPR036612 GO:0003723
Bva06g02591 690 CDD PCBP_like_KH 328 397 - -
Bva06g02591 690 ProSiteProfiles Type-1 KH domain profile. 44 111 - -
Bva06g02591 690 ProSiteProfiles Type-1 KH domain profile. 615 679 - -
Bva06g02591 690 SMART kh_6 325 398 IPR004087 GO:0003676
Bva06g02591 690 SMART kh_6 43 120 IPR004087 GO:0003676
Bva06g02591 690 SMART kh_6 614 684 IPR004087 GO:0003676
Bva06g02591 690 SMART kh_6 180 255 IPR004087 GO:0003676
Bva06g02591 690 SMART kh_6 409 484 IPR004087 GO:0003676
Bva06g02591 690 CDD KH-I 617 680 - -
Bva06g02591 690 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 326 401 IPR036612 GO:0003723
Bva06g02591 690 MobiDBLite consensus disorder prediction 1 24 - -
Bva06g02591 690 CDD PCBP_like_KH 183 251 - -
Bva06g02591 690 MobiDBLite consensus disorder prediction 253 280 - -
Bva06g02591 690 MobiDBLite consensus disorder prediction 91 145 - -
Bva06g02591 690 Gene3D K Homology domain, type 1 408 487 IPR036612 GO:0003723
Bva06g02591 690 Gene3D K Homology domain, type 1 179 259 IPR036612 GO:0003723
Bva06g02591 690 Gene3D K Homology domain, type 1 39 108 IPR036612 GO:0003723
Bva06g02591 690 ProSiteProfiles Type-1 KH domain profile. 326 393 - -
Bva06g02591 690 Pfam KH domain 184 250 IPR004088 GO:0003723
Bva06g02591 690 Pfam KH domain 47 100 IPR004088 GO:0003723
Bva06g02591 690 Pfam KH domain 328 380 IPR004088 GO:0003723
Bva06g02591 690 Pfam KH domain 413 479 IPR004088 GO:0003723
Bva06g02591 690 Pfam KH domain 617 680 IPR004088 GO:0003723
Bva06g02591 690 Gene3D K Homology domain, type 1 324 402 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02591 Bva-Chr6 16353121 16357114 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02591 K21444 - qsu:112004419 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02591 06 16353121 16357114 Bva06g02591 06 16353121 16357114 ECH