Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02573 ATGGATGTTGAATCGGGTGCTCGCGGGCCACCAGAACTCGACGATGATGGAAGAATCAAAAGAACCGATTGCTATAGACACCCTGTCACTGGCAAGAGGAACTACACTTACATGGACGCTGTCAAAGTCACTTTAGGTTCAAGAATGAGTGTTTTTTGTGGAATGGTTCAGTACTCTGTTCTTGCTGGCTCCGCAATCGGCTATACAATAACAACATCTATAAGCGTGGTAGCAATACGAAGATTCGATTGCTTCCACAAACAAGGGGTTGATGCTCCATGCCATTTTTCCAATAATCCATCTATGATTGCGTTTGGAATTGTTCAAATCTTTTTGTCCCAAATACCCAACTTCCACAAATTGTCATGGCTCTCCATCATAGCAGCCATTATGTCTTTTGGGTATGCATCCATTGGTATTGCACTCTCTCTTTCGGTCGTCATCAGAGGTAATGGAAAGAGTACCTCTATATTTGGGGGAAGCGAGGGCCAGTTTACAGCAGAGAGGATGTGGAATATGCTCGTTGCTTTGGGAAACATAGCACTCGCTAGTGCATTTGCTGTAGTTATATTTGATATCCAGGACACATTAAGGTCGTCAAAgccagaaaatgaagaaatgaagaaggcTAACATGATAGGGTTAACCACTATGgcagttttctttctcttgtgtgCATGCACTGGTTATGCTGCATTTGGGGATGAAACTGCAGGCAACATCATGACCGGCTCAAAAATCTTCAAGCCCCTCTGGGTAATGTACCTGGGCAATGTCTTTATTGTGGTGCACCTGGTCGGAGCCCATCAGGTACTTGTTCAACCCGTTTACCGTATGTTTGAAACATTTGCTGGCAAGAGGTGGCCAAGTTCAAGTTTTGTGACAAGGAAGTACAGTCTGAGAATTGGCAAAATAGGATTCAGTGTGAATATGCTGAGGCTTGTTTGGAGGACATTATTTGTGGTGGTGACGAGTGTGCTTGCCATGGCAATGCCCTTTTTCAATCACATGCTTGCGCTTCTTGGAGCTGTGGGGTTCTGGCCCGTGGTGGTTTATTTCCCAATCGCCATGTCCATTGCCAaccaaaagaccaaaaaagcGTCATTGCGCTGGTTTGGTCTCCAAATTCTCAACTTGTCATGCTTTCTTGTGTCGGTGGCTGCAGTTTGTTCTGCTGTTCGTGGCTTGAGCAGAGGTCTTTCCCAATACAAGCCCTTCATGTATAGAGAATA 1232 0.4269 MDVESGARGPPELDDDGRIKRTDCYRHPVTGKRNYTYMDAVKVTLGSRMSVFCGMVQYSVLAGSAIGYTITTSISVVAIRRFDCFHKQGVDAPCHFSNNPSMIAFGIVQIFLSQIPNFHKLSWLSIIAAIMSFGYASIGIALSLSVVIRGNGKSTSIFGGSEGQFTAERMWNMLVALGNIALASAFAVVIFDIQDTLRSSKPENEEMKKANMIGLTTMAVFFLLCACTGYAAFGDETAGNIMTGSKIFKPLWVMYLGNVFIVVHLVGAHQVLVQPVYRMFETFAGKRWPSSSFVTRKYSLRIGKIGFSVNMLRLVWRTLFVVVTSVLAMAMPFFNHMLALLGAVGFWPVVVYFPIAMSIANQKTKKASLRWFGLQILNLSCFLVSVAAVCSAVRGLSRGLSQYKPFMYRE 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02573 410 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 22 403 - -
Bva06g02573 410 Pfam Transmembrane amino acid transporter protein 23 393 IPR013057 -
Bva06g02573 410 PANTHER OS05G0424000 PROTEIN-RELATED 22 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02573 Bva-Chr6 16260906 16263765 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02573 23 406 Organic Solute Cotransporters AT1G10010 49.357 2.92e-135 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02573 K24917 - gmx:100804643 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02573 06 16260906 16263765 Bva06g02573 06 16260906 16263765 ECH