Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02572 ATGCTGAGTGTGATAGATAAACAACCTCAACTTGAGCTACGCGACTCAGGTTTGGATCCTCACAACAAACTGACTGGTGCAGAGCCAGAGGTCGATGATGATGGAAAACCCAAAAGAActgGGAGTGCGTGGAGTGCAAGTGCACACATAATTACGGCAGTGATAGGGGCGGGAGTGCTGGCGCTGCCATGGGGTGTGGCTCAGCTAGGATGGATAGCAGGCATTGCTGTTCTTTCCATCTTTGCTCTAATCTCACTTTACACTTACAATCTTTTATCAGATTGCTACAGATCTCCAGATCCACTCACTGGCTCCAGGAATTACACTTATATGCAAGCCGTCAAGGCATACTTGgGGAAAGGACAGAGAACCACTATAAGCGGAGTACAATCACCAGCAGATAAAGTTTGGAAAGTTTTTAGTGCTTTAGGAAACATAGCACTTGCTTGCTCCTATGCtacaattttgtttgatattgAGGACACATTAAGGTCACACCCACCAGAAAACAAACAGATGAAGAGAGCTAACTTGATGGGAATCTCAACAATGGCGATACTCTTTCTCATATGTGGTGGCTTTGGCTATGCTGCTTTTGGCGACCACACACCGGGAAACATGCTCACCGGATTTGGATTTTATGATCCGTTTTGGTTGGTTGACTTGGGAAATTTATTCATTGTGATTCACCTTGTGGGAGCATATCAGGTAATGGCTCAACCAGTTTATCGAATCGTTGAAACGGGTGCAAACATCAAGTGGCCAAATTCAGAGTTCATTAACAGAGAGTACTCAGTGAGAGTTGGGAAAGTAGCATTCAATTTGAACTCCTTTAGGCTAATTTGGAGGACAGTATTTGTGATGGTGGCGACAATTCTATCTATGGCAATGCCATTTTTCAATGAGATGCTTGCCTTGCTCGGAGCTCTTGGCTTTTGGCCCTTGGTTGTATTTTTCCCCATACAGATGCACATCGCTCAGAAACAGATAAGAAAGCTATCATTCGCGTGGCTCGGGCTCCAACTGTTGAGCTTTGcttgctttcttgtttcaatCACGGCAGCTTGTGGTGCCATTCATGGCTTGAACAAGAATCTCCGCAAATACAAGCCATTTATGTATAAGCAATA 1130 0.4319 MLSVIDKQPQLELRDSGLDPHNKLTGAEPEVDDDGKPKRTGSAWSASAHIITAVIGAGVLALPWGVAQLGWIAGIAVLSIFALISLYTYNLLSDCYRSPDPLTGSRNYTYMQAVKAYLGKGQRTTISGVQSPADKVWKVFSALGNIALACSYATILFDIEDTLRSHPPENKQMKRANLMGISTMAILFLICGGFGYAAFGDHTPGNMLTGFGFYDPFWLVDLGNLFIVIHLVGAYQVMAQPVYRIVETGANIKWPNSEFINREYSVRVGKVAFNLNSFRLIWRTVFVMVATILSMAMPFFNEMLALLGALGFWPLVVFFPIQMHIAQKQIRKLSFAWLGLQLLSFACFLVSITAACGAIHGLNKNLRKYKPFMYKQ 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02572 376 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 129 370 - -
Bva06g02572 376 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 31 122 - -
Bva06g02572 376 MobiDBLite consensus disorder prediction 14 40 - -
Bva06g02572 376 Pfam Tryptophan/tyrosine permease family 41 123 IPR018227 GO:0003333
Bva06g02572 376 PANTHER OS05G0424000 PROTEIN-RELATED 129 370 - -
Bva06g02572 376 PANTHER OS05G0424000 PROTEIN-RELATED 31 122 - -
Bva06g02572 376 Pfam Transmembrane amino acid transporter protein 124 359 IPR013057 -
Bva06g02572 376 MobiDBLite consensus disorder prediction 14 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02572 Bva-Chr6 16256754 16260106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02572 119 372 Organic Solute Cotransporters AT5G49630 50.575 3.11e-97 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02572 K24917 - cpap:110822058 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02572 06 16256754 16260106 Bva06g02572 06 16256754 16260106 ECH