Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02571 atggaCAAGTCTCTATTACAACGGCAAGCTTCTTCGATGAGAAGGGCACTCTTTGATCAGGGGTACCTTGATGAGCAATTTATTGAGCTGGAAGATTTGCAGGATGATAGCAATCCCAACTTTGTGGAGGAAATTGTGACATTATTTTACAAGGAATCGGCTAGAACGGTCTACAACATAGAGCAGGCATTaatgaGTAGACCACTGGATTTCACCAAGCTGGAGGAGTACATGCATAAATTCAAGGGAAGTTCCTCCagCATCGGAGCGAAGAAGGTGAAGAACGAATGCACTAAGTTCAGTGAATATTGCGATGCAGAAAACACCGATGGATGCGTCAGGACTTTCCAACAAATCAAGCAAGAGtattcaactttgaagaacAAACTTGAAACTTACTTTCaggTAGCAAGGGAAGCTGCACAAACTTA 431 0.3991 MDKSLLQRQASSMRRALFDQGYLDEQFIELEDLQDDSNPNFVEEIVTLFYKESARTVYNIEQALMSRPLDFTKLEEYMHKFKGSSSSIGAKKVKNECTKFSEYCDAENTDGCVRTFQQIKQEYSTLKNKLETYFQVAREAAQT 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02571 143 Pfam Hpt domain 44 128 IPR008207 GO:0000160
Bva06g02571 143 Gene3D HPT domain 2 143 IPR036641 GO:0000160
Bva06g02571 143 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 2-LIKE 4 141 - -
Bva06g02571 143 PANTHER - 4 141 IPR045871 GO:0000160|GO:0009927|GO:0043424
Bva06g02571 143 CDD HPT 42 123 IPR008207 GO:0000160
Bva06g02571 143 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Bva06g02571 143 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 138 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02571 Bva-Chr6 16251835 16255235 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02571 K14490 - vvi:100252462 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02571 06 16251835 16255235 Bva06g02571 06 16251835 16255235 ECH
Bva08g02190 08 14373870 14375042 Bva06g02571 06 16251835 16255235 ECH
Bva02g02358 02 23098055 23099480 Bva06g02571 06 16251835 16255235 ECH