Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02569 ATGGAAGACGGGAGAATACTGGAAAGAGAGAGGCTCCAGATCGAGCATATTCAGCAGCAGCTCGATCACGAGGAATTGCAGTTTGAAGAAGTCGATGACCTTCAAGACTCATCCGGCGATGACCAGGACCCAACTGCTCTTGGTTACGGTGGCGCTGGCACATCTAGTGAATTCAACTTCAATACCAGCATAGCTTCTTTACATACGTATCTCGGTGAGGTTGAAGACACGCACAACAGAACAGTTTTTTTGGATGGCGGTGCTATTTTGAACCTAccacttttctattttgaagGAGTTGTACTCTTTCCTGGGGCTACACTTCCCCTAAGAGTTATTCAGTCCAATTTTGTAGCTGCTATCGAGAGAGCATTGAGCCAAGTTGATGTTCCTTATACCATTGGTGTGATTCGAATTTACAGGGAACCTCGTGATCTTAGGATGAAATTGGCTACAGTTGGGACAACTGCAGAGGTTCGACAATACAGGCGACTAGAGGATGGTTCACTAAATGTTGTTACTCGTGGCCAACAGCGATTTTGCCTAAGACGCCATTGGATTGATGTGGAACGAGTGCCTTATGGAGAGATCCAGATTATCAAGGAAGATCTACCCTTGAGAACTCCAAGGGATGCTTTTGGTAGATTAGCACCATTAAGCAATCTTTCATCACGTAGGCTGGCTTCAAAGAAATCTATTGCACTAATGCTCAGGTCTAAAACTGGAGAGACTGAGTCAGAAGAAAATTCAGATGAAAGCTTCCAGAATGGGCTCTCACTAACAGAAAGGAGAATTCATCAATCTGTAACTGGTTCCAGTTATGAACATGATACGATGGATGAACCAGCAAGCAGTGACGATGATAGATTCATGTATGAGTCAGATCAGGAAATTAGGTCTAATCTAAATGACTCTGACTCCATGAAAGCATTGCTATCTTATCCTGGGAAGCAAACCGAAATGGACTCAAGAAATGGGAACTGTTCCACTTCAGGAAAACAATCCTGCAAAGTGGAAATGCTTAGTAATTGTTGTAAAAATACAGATGCCTACCTATCACGTGGAATTTCAAGAGCATTCTGGCCCCATTGGGTATATCGTATGTTCGATTCATATTGCCTTGCTCAAAGAGCAGGAGATATGTGGAAGCAGATAGTTGGGGCGCCGAACGTTGATGGTCTTCTGAAGAAGCCTGATCTCTTATCATTTCATATTGCGAGTAAAATTCCTGTGTCTGAATCAACAAGGCAAGAGCTTTTAGAAATCGATGGCATTCCATATAGATTGCGTCGGGAAATTGAATTGCTCGAGAGCATAAATCTTATTCGATGTAAAAATTGCCTGACTATAATTGCAAGGCGAAGTGATATGTTAGTGATGTCTAGTGAAGGTCCCCTTGGTGCTTATGTGAATCCGGGGGGTTATGTGCATGAGATAATGACTCTCTTCAAAGCAAATGGGTTAGCACTACAAGGGCCAGCAATCACACGGTACAGTTGGTTTCCTGGGTATGCGTGGACAATCACGAACTGTGCCACATGCGGGACCCAAATGGGATGGCTTTTTACAGCTACGAAGAGCAAACTGAAACCTAGATCATTTTGGGGGATACGAAGTTCTCAAGTTGCAGAAGAAACGCGCTA 1643 0.4315 MEDGRILERERLQIEHIQQQLDHEELQFEEVDDLQDSSGDDQDPTALGYGGAGTSSEFNFNTSIASLHTYLGEVEDTHNRTVFLDGGAILNLPLFYFEGVVLFPGATLPLRVIQSNFVAAIERALSQVDVPYTIGVIRIYREPRDLRMKLATVGTTAEVRQYRRLEDGSLNVVTRGQQRFCLRRHWIDVERVPYGEIQIIKEDLPLRTPRDAFGRLAPLSNLSSRRLASKKSIALMLRSKTGETESEENSDESFQNGLSLTERRIHQSVTGSSYEHDTMDEPASSDDDRFMYESDQEIRSNLNDSDSMKALLSYPGKQTEMDSRNGNCSTSGKQSCKVEMLSNCCKNTDAYLSRGISRAFWPHWVYRMFDSYCLAQRAGDMWKQIVGAPNVDGLLKKPDLLSFHIASKIPVSESTRQELLEIDGIPYRLRREIELLESINLIRCKNCLTIIARRSDMLVMSSEGPLGAYVNPGGYVHEIMTLFKANGLALQGPAITRYSWFPGYAWTITNCATCGTQMGWLFTATKSKLKPRSFWGIRSSQVAEETR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02569 547 Gene3D - 85 200 IPR046336 -
Bva06g02569 547 MobiDBLite consensus disorder prediction 239 288 - -
Bva06g02569 547 MobiDBLite consensus disorder prediction 251 278 - -
Bva06g02569 547 SUPERFAMILY PUA domain-like 91 437 IPR015947 -
Bva06g02569 547 SMART lon_5 91 438 IPR003111 -
Bva06g02569 547 Gene3D - 370 435 - -
Bva06g02569 547 Coils Coil 7 34 - -
Bva06g02569 547 MobiDBLite consensus disorder prediction 30 51 - -
Bva06g02569 547 Pfam ATP-dependent protease La (LON) substrate-binding domain 91 437 IPR003111 -
Bva06g02569 547 CDD CRBN_C_like 442 542 IPR034750 -
Bva06g02569 547 ProSiteProfiles CULT domain profile. 439 546 IPR034750 -
Bva06g02569 547 PANTHER CEREBLON 1 543 - -
Bva06g02569 547 ProSiteProfiles Lon N-terminal domain profile. 92 438 IPR003111 -
Bva06g02569 547 Gene3D Peptide methionine sulfoxide reductase. 436 547 - -
Bva06g02569 547 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 441 541 IPR004910 -
Bva06g02569 547 PANTHER BNAA09G40760D PROTEIN 1 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02569 Bva-Chr6 16242339 16247592 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02569 K11793 - jre:109009469 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02569 06 16242339 16247592 Bva06g02569 06 16242339 16247592 ECH