Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02542 ATGGCCATGGCGATTAGggcttttctcatttttgtaCTGTTTCTCTCCTCTACTCAGTTTTGCTTTTCACTTTATGAAGATCAAGTTGGCCTCATGGATTGGCACCATCAATACCTTGGGAAAGTAAAGCATGCAGTGTTTCATACTCAGAAGACTGGACGGAAGCGTGTTTTAGTGTCCACTGAAGAAAATGTGGTTGCTTCACTTGACCTCCGTCATGGAGATATTTTTTGGAGGCAAATTCTTGGGACCAACGACGCTGTTGATGCACTTGACATTGCCCTGGGAAAATATATCATTACTCTTTCCTCTGATGGAAGCATATTGAGAGCATGGAACCTTCCTGATGGACAGATGGTTTGGGAGTCTTCCCTTCAAGGCTTAAAGATGTCGAAgtcaatattaaatattccaaaaaatttgaaagccAACAAGGATGATttgattcttatttttggtCAAGGATGTCTCCATGCTGTTTCCAGCATAGATGGTGAGGTTCTCTGGAAGAAAGACTTTTCAGGTCAAAGCATTGAGGTTCAGCAGATTATTCATTCACCCCATAATGATATAGTCTATGTAGCTGGATTTGTTGGTTCTTCTAACTTCTATGTGTATAAAGTCAATGCTAAGAATGGAGAGTTGTTAAAGGACAATAATGTGGAACTTCCCTCTGGTACTTATGGGGAATTATTATCAGTCTCAAGTGATATGTTTGTAGTATTGGAAGATACGAGGTCAAAGATAGTAATGATTGATCTCAAGAATGAAGAGATTAACTACAAGTACAGTCATATTTCAGACCTGATCAAGTATTCATCTGGACAGGCTGTAATATTACCCTCAAGACTTCCAGGGATATTTGCTTTACAACTCAATTCCcatagtattttaattaaagtggCAAATGAAGGTGGGTTGGTGCTGGTGGAAAAGATTAATGATGCAGCAGCTATAAGTGACGCTGTGTCAATTTCAGAAGGCCAacatgcttttgcttttgttcaacatgaagacaataaaatttacttcaCTGTAAAGGATGTTGACAACTGGAATGCTGACTTGCTTAAGGAAAGAATAGTAATAGACAATCAAAGAGGGAatattgaaaagatttttataaacaattatatcaGGACAGATAGATCAAATGGCTTTAGAGCATTGATAGCAATGGAGGATCATTCTCTCTTATTAGTACAACAAGGAGATATTGTCTGGAGTAGAGAAGATGGTCTTGCCTCAGTTGTAGATGTAACAACATCAGAACTGCCTGTGGAAAAGAAAGGGGTATCTGTGGCAAAAGTGGAGCAGAACCTCTTTGAATGGCTTAAGGGACATATGCTAAAGCTCAAAGGAACTTTAATGATTGCAAGCCCTGAGGATGTAGTGGCTATTCAAGCAATGAGATTGAAGAGTTCTGAGAAAAGTAAGATGACTCGTGATCATAATGGTTTCCGCAAATTGCTTATAGTACTTACCAGGGCGGGAAAAGTTTTTGCCTTACATACTGGAGATGGACGCATAGTTTGGTCTGTGCTACTACGCACCCTACGGAAATCAGATGCATGTGAACGTCCAGTTGGGCTCAACATTTATCAGTGGCAGGTTCCACATCATCATGCAATGGATGAGAATCCATCTGTTCTTGTAGTTGGACGATGTGGACCAAGTTTGGCTGCACCAgctgttctttcttttattgatgCATACACAGGAAGGGAACTCAATTCCTTGAGTCCTGCTCATACTGTTGCCCAAGTTATTCCACTGCCTTATACTGATTCAACAGAACAGCGTCTCCATCTAATTATAGATGTTAATCAGCAAGCATATCTATACCCCAAAACTCCCAAAGCTATTGACATTCTGCAACATGAGTTTTCAAATGTGTACTGGTACTCAGTTGAGGTGGACAATGGTATTATTAGAGGCCATGCCTTAAATAGCAGATGCAATCGTGAAGTAGTGGATGAATACTGCTTTGATTTCAGGGACTTGTGGTCAATTGTATTCCCATCTGAATCAGAAAGGATCATTACGACAACAAGAAGGAAACTAAACGAGGTGGTTCATACTCAAGCAAAGGTTATGACTGACCAAGATGTGATGTATAAGTATATATCGAAAAATCTACTTTTTGTGGCAAATGTGGCTCCAAAAGCTAGAGGTGAAATTGGAACAGCAACCCCAGAGGAGTCATGGTTGGTCATTTACATTATTGATACTGTGACTGGTCGCATTTTGCATCGCATGACTCATCATGGTTGCCAGGGTCCCGTTCATGCTGTATTTAGCGAGAACTGGGTTGTCTACCACTATTTTAATCTCAGAGCACACAGACATGAGATGTCAGTCATTGAGGTGTATGACCAATCTCGTGCGGATAATAAAGATGTTTGGAAGCTGCTTGTTGGGAAGCATAATCTAACATCACCGATCTCTTCATATTCTCGACCAGAAGTCATAACAAAATCACAATCATACTACTTCACCCATTCTGTTAAAGCAATAGAAGCGACTTCCACTGCCAAGGGTATAACCTCCAAGCAGCTGCTTATTGGAACAATTGGTGATCAGGTTTTGGCACTTGATAAACGTTTTTTGGATCCTCGGCGAACACTCAATCCCTCACAAGCCGAGAAGGAAGAAGGAATAATTCCTCTTACTGATTCGTTGCCAATTGTCTCTCAGTCTTATATCACACATTCCCTCAAGGTGGAAGGTCTCCGAGGTATAGTAACTGTACCTGCCAAGCTGGAGTCTACATCCCTCGTCTTTGCATACGGGGTAGATCTATTTTTCACCCGGATTGCTCCGTCAAGGACTTACGATTCACTAACTGAAGATTTCAGCTATGCTCTACTTCTTATCACAATAGTTGCACTTGTGGCAGCCATATTTGTTTCTTGGGTATTATCTGAAAGGAAAGAACTGCAAGACAAGTGGAGGTG 2957 0.3889 MAMAIRAFLIFVLFLSSTQFCFSLYEDQVGLMDWHHQYLGKVKHAVFHTQKTGRKRVLVSTEENVVASLDLRHGDIFWRQILGTNDAVDALDIALGKYIITLSSDGSILRAWNLPDGQMVWESSLQGLKMSKSILNIPKNLKANKDDLILIFGQGCLHAVSSIDGEVLWKKDFSGQSIEVQQIIHSPHNDIVYVAGFVGSSNFYVYKVNAKNGELLKDNNVELPSGTYGELLSVSSDMFVVLEDTRSKIVMIDLKNEEINYKYSHISDLIKYSSGQAVILPSRLPGIFALQLNSHSILIKVANEGGLVLVEKINDAAAISDAVSISEGQHAFAFVQHEDNKIYFTVKDVDNWNADLLKERIVIDNQRGNIEKIFINNYIRTDRSNGFRALIAMEDHSLLLVQQGDIVWSREDGLASVVDVTTSELPVEKKGVSVAKVEQNLFEWLKGHMLKLKGTLMIASPEDVVAIQAMRLKSSEKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGRIVWSVLLRTLRKSDACERPVGLNIYQWQVPHHHAMDENPSVLVVGRCGPSLAAPAVLSFIDAYTGRELNSLSPAHTVAQVIPLPYTDSTEQRLHLIIDVNQQAYLYPKTPKAIDILQHEFSNVYWYSVEVDNGIIRGHALNSRCNREVVDEYCFDFRDLWSIVFPSESERIITTTRRKLNEVVHTQAKVMTDQDVMYKYISKNLLFVANVAPKARGEIGTATPEESWLVIYIIDTVTGRILHRMTHHGCQGPVHAVFSENWVVYHYFNLRAHRHEMSVIEVYDQSRADNKDVWKLLVGKHNLTSPISSYSRPEVITKSQSYYFTHSVKAIEATSTAKGITSKQLLIGTIGDQVLALDKRFLDPRRTLNPSQAEKEEGIIPLTDSLPIVSQSYITHSLKVEGLRGIVTVPAKLESTSLVFAYGVDLFFTRIAPSRTYDSLTEDFSYALLLITIVALVAAIFVSWVLSERKELQDKWR 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02542 985 SMART ire1_9 484 515 IPR018391 -
Bva06g02542 985 SMART ire1_9 707 754 IPR018391 -
Bva06g02542 985 SMART ire1_9 142 172 IPR018391 -
Bva06g02542 985 SMART ire1_9 189 220 IPR018391 -
Bva06g02542 985 Pfam PQQ-like domain 53 260 IPR002372 -
Bva06g02542 985 Pfam ER membrane protein complex subunit 1, C-terminal 767 984 IPR011678 -
Bva06g02542 985 PANTHER UNCHARACTERIZED 9 985 IPR026895 GO:0072546
Bva06g02542 985 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 55 588 IPR011047 -
Bva06g02542 985 Gene3D - 27 344 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02542 Bva-Chr6 16100061 16105935 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02542 K23562 - gmx:100790095 1662.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02542 06 16100061 16105935 Bva06g02542 06 16100061 16105935 ECH