Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02537 ATGGTGAATTCTTTGGTAGAAAGAGCCACGAGCGACATGCTCATCGGCCCTGATTGGGCCAGGAATATCGAGATCTGTGATATGCTGAATAACGATCCTGGGCTGGCAAAGGATGTCGTTAAAGGTATAAAGAAGCGAATTGGAAGTAAGAATTCAAAAGTTCAACTCCTTGCATTGACTCTACTGGAAACAATCATAAAGAATTGTGGTGACATTGTTCACATGCACGTAGCAGAGAGAGATGTTCTGCATGAGATGGTGAGAATAGCAAAGAAGAAGCCTGATTTGCAAGTTAGAGAGAAGATACTCAGTCTTATAGATACTTGGCAAGAGGCGTTTGGAGGACCGAGGGCAAGATATCCACAGTACTATGCTGCATACCAGGAACTGTTGCGTGCTGGGGCAGTATTTCCTCAGAGGTCTGAGCGATCTGCACCTGTTCTTACACCTCCCCAAACACAACCATTGGCTTCATATCCTCAAAATTTACGTAATCCTGATTTTCAGCAGGACACAGCTGAGTCTTCAGCAGAGTCTGAGTTCCCTACCCTAAGTTTGTCCGAAATTCAGAATGCACGTGGTATTATGGATGTTCTTGCAGAAATGCTCAGTGCGATAGACCCGGGTAACAAAGAAGTAAGTGGTTCAGTTCAAAGgTGTGGCAGTTCTGAACATAATTCTGGAAATTGTATTCATGAATTTGACAGATCTCCATCAGTTATGGGCCTTAGGCAGGACGTTATTGTTGATTTGGTGGAGCAATGTCGTATGTACAAACAGAGAGTGGTACACCTTGTTAACTCAACTTCGGATGAATCTCTGCTGTGCCAAGGACTGGCTCTAAATGATGATTTGCAGCGTGTACTTGCCAAGCATGAATCCATTGCTTCAGGCTCAGTACCATCTGTTCAAAATCAGACAGAGAAACCTAAGCCTGAACCTGCTGGGGCACTTGTAGATGTTGGCGGTCCTTTAATTGATACTGGAGATGCTAGCAAACGAACTGATGGGAGatCCGCCTCTAGTGCTGATGCAGGGGCCCAAACATTTAAGCAGCTATTGCTTCCTACACCCAACACGCCTAATGGTTCAGCTCCACTTGCCAAGGCTGATCCCAAAATTGACCTGCTCAGTGGTGATGACTATAGCTCACCAAAAGCTGAGACTTCGCTTGCTCTTGTTCCTGTAGGAGAACAGCAGTCCGCCAGTCCTGTGTCTCAACAGAATGCCCTAATTCTTTTTGACATGCTTTCTGATGGTAACAGTGGATCAAATTCTATCAATGCGCAGCCAACCCAATCAGCTAATGTTGCTGGCCAAAACAGTCCCTTGGCACACCAGTTTCAGCACCAGCAGGCTTTTATGACTCCTCAAGGTGGATTTTACCCTAATGGAAGTGCCCAAAATATGGGGTCACCTCCGTATGAGCAGTCACCGTACTCCCAAAGCACAAGTCCCGCATGGAATGGTCAGGTTGCACAGCAGCAACAACCACCATCACCCGCTTATGGTGCAACTAATGGTGCATCGAGCAGTGGATCATTGCCACCACCTCCCTGGGAAGCTCAACCAACAGATAATGGTAGCCAAGTTGCAGGCACTCAACAAGTGCAGGTCACTCAAGTGGTTATGACTCATCTACAGAATGGTGCACATCCTCAGGGACCTCAAGCAATTGGGAACGACCAGATGGTCGGTATGTATATGCAGCCAAATACTAACAGCCATATGTCAGCTATTAATGGCCATGTCGGTCAAAACAATCTGGCGGGTTTGCACCCTCAGTATACTCAGGGAGGAGTAGGACCCTATATGGGTATGGTTCCACTTCCACATCAAATGCAAGCTGGTCCTATGGCATCCATGTATCCTCAACAGATTTATGGCAACCAATTCATGGGATATGGCTATGGTCAGCAGCAAGGAGTTCAATACGTTGAGCAGCAAATGTACGGTCTATCTGTTAGAGATGACAGTGCTTTGAGAAACTCCTACCAGGTTTCTGCTTCATCTTATGTTCCCTCGGGAAAGCCTTCCAAGCCAGAGGATAAGTTATTTGGGGACCTTGTTGACATGGCAAAAGTGAAGCCAAAACCTACGCCAGATTCAGATTGGAATTCGTTGAGATTTCAGTTGAAAAAGTCATTCCGAGGTTTGCTTTTTTTCGTCTGCGTTATATCAACAGTAATCAGTATGCAGGCATCGCGGGCAAGGCTCTTCAAGGAGTATAAAGAGGTTCAGCGGGAGAAAGCAGTTGATCCTGATATTCAGCTAGTCTGTGATGattctaacatttttaaatggaCTGCCCTTATCAAGGGACCGTCAGAGACTCCTTACGAGGGTGGTGTTTTCCAGCTTGCATTTGCTATCCCAGAGCAATATCCTCTACAACCTCCTCAAGTGCGGTTCTTGACAAAGATATTTCACCCAAATGTGCATTTTAAGACGGGGGAGATTTGTCttgatatattgaaaaatgCTTGGAGCCCAGCTTGGACACTTCAATCTGTCTGTAGGGCTATAATCGCTCTGATGGCCCATCCGGAACCTGACAGTCCATTGAATTGTGATTCAGGTAATCTGTTGCGTTCTGGTGATGTTAGAGGGTACCAGTCCATGGCAAGGATGTACACTAGGCTTGCAGCAATGCCGAAGAAAGGTTG 2666 0.4569 MVNSLVERATSDMLIGPDWARNIEICDMLNNDPGLAKDVVKGIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVRIAKKKPDLQVREKILSLIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPQRSERSAPVLTPPQTQPLASYPQNLRNPDFQQDTAESSAESEFPTLSLSEIQNARGIMDVLAEMLSAIDPGNKEVSGSVQRCGSSEHNSGNCIHEFDRSPSVMGLRQDVIVDLVEQCRMYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESIASGSVPSVQNQTEKPKPEPAGALVDVGGPLIDTGDASKRTDGRSASSADAGAQTFKQLLLPTPNTPNGSAPLAKADPKIDLLSGDDYSSPKAETSLALVPVGEQQSASPVSQQNALILFDMLSDGNSGSNSINAQPTQSANVAGQNSPLAHQFQHQQAFMTPQGGFYPNGSAQNMGSPPYEQSPYSQSTSPAWNGQVAQQQQPPSPAYGASSSGSLPPPPWEAQPTDNGSQVAGTQQVQVTQVVMTHLQNGAHPQGPQAIGNDQMVGMYMQPNTNSHMSAINGHVGQNNLAGLHPQYTQGGVGPYMGMVPLPHQMQAGPMASMYPQQIYGNQFMGYGYGQQQGVQYVEQQMYGLSVRDDSALRNSYQVSASSYVPSGKPSKPEDKLFGDLVDMAKVKPKPTPDSDWNSLRFQLKKSFRGLLFFVCVISTVISMQASRARLFKEYKEVQREKAVDPDIQLVCDDSNIFKWTALIKGPSETPYEGGVFQLAFAIPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02537 884 PANTHER TOM1-LIKE PROTEIN 1 212 IPR044836 GO:0035091|GO:0043130|GO:0043328
Bva06g02537 884 CDD VHS 2 132 - -
Bva06g02537 884 MobiDBLite consensus disorder prediction 145 182 - -
Bva06g02537 884 PANTHER TARGET OF MYB PROTEIN 1 1 212 - -
Bva06g02537 884 SMART ubc_7 733 880 - -
Bva06g02537 884 PANTHER TOM1-LIKE PROTEIN 241 697 IPR044836 GO:0035091|GO:0043130|GO:0043328
Bva06g02537 884 SUPERFAMILY UBC-like 729 880 IPR016135 -
Bva06g02537 884 SUPERFAMILY GAT-like domain 234 298 - -
Bva06g02537 884 MobiDBLite consensus disorder prediction 456 529 - -
Bva06g02537 884 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Bva06g02537 884 PANTHER TARGET OF MYB PROTEIN 1 241 697 - -
Bva06g02537 884 Gene3D Ubiquitin Conjugating Enzyme 727 879 IPR016135 -
Bva06g02537 884 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Bva06g02537 884 Pfam VHS domain 3 129 IPR002014 GO:0035091|GO:0043130
Bva06g02537 884 Gene3D - 183 301 IPR038425 -
Bva06g02537 884 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 730 880 IPR000608 -
Bva06g02537 884 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 805 821 IPR023313 -
Bva06g02537 884 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Bva06g02537 884 MobiDBLite consensus disorder prediction 142 182 - -
Bva06g02537 884 Pfam Ubiquitin-conjugating enzyme 734 874 IPR000608 -
Bva06g02537 884 MobiDBLite consensus disorder prediction 456 507 - -
Bva06g02537 884 Gene3D - 1 147 IPR008942 -
Bva06g02537 884 ProSiteProfiles GAT domain profile. 170 297 IPR004152 GO:0035091|GO:0043130
Bva06g02537 884 CDD UBCc 734 875 IPR000608 -
Bva06g02537 884 MobiDBLite consensus disorder prediction 298 345 - -
Bva06g02537 884 Pfam GAT domain 196 297 IPR004152 GO:0035091|GO:0043130
Bva06g02537 884 SUPERFAMILY GAT-like domain 141 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02537 Bva-Chr6 16058100 16068108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02537 734 850 Miscellaneous Gene Families AT3G17000 34.711 3.17e-14 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02537 - - gmx:100809022 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02537 06 16058100 16068108 Bva06g02537 06 16058100 16068108 ECH