Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02533 ATGGCCTACTCCGATTCCATCTCCGCCTCACCGACCGCCGCCGTCCACGGTGACTCTGTCTTCGCTCACCTCGTTCGTGCTCCCGAAGATCCTATCCTCGGGGTGACGGTTGCCTACAACAAAGATCAAAGCCCAGTTAAGCTAAATTTGGGAGTCGGTGCTTACCGAACAGAGGAAGGAAAACCTCTTGTTTTGAATGTAGTAAGACGAGTAGAACAGCAACTCTTGAATGACAAGGCTCGCAACAAGGAATACCTTCCTATTGTTGGGCTGGCTGATTTCAATAAATTGAGTGCTAAGCTCATTCTTGGTGCTGACAGCCCTGCTATTCAAGAAAACAGGGTTACCACTGTCCAGTGCTTGTCTGGTACTGGGTCATTGAGAGTTGGAGGCGAGTTTTTGGCTAAACATTATCATCAACGGATTGTATACCTGCCTCAACCAACTTGGGGGAATCACCCCAAGGTTTTCACACTGGCAGGGTTATCTGTCAAAACATACCGCTATTATGCTCCAGCGACACGAGGACTTGACTTTGaagGACTCTTGGAAGACATTGGTTCTGCTCCATCTGGATCTATTATTTTGCTTCACGCATGCGCCCATAATCCTACTGGTGTTGATCCAAGCCCTGACCAATGGGAGCAGATCAGACAGCTGATAAGATCAAAAGCTTTGTTACCGTTCTTTGACAGTGCTTATCAGGGTTTTGCCAGCGGAAGTCTAGATGCAGATGCACAGCCTGTACGTTTGTTTGCTGCTGATGGTGGTGAAATGCTGGTGGCCCAGAGTTATGCAAAAAACATGGGGCTTTATGGAGAGCGTGTTGGTGCCCTAAGCATTGTCTGCAAGTCAGCTGATGTTGCAATCCGGGTTGAGAGTCAGGTGAAACTTGTGATTAGGCCTATGTACTCAAACCCTCCTATTCATGGTGCATCCATTGTGGCTGCAATTCTCAAGGACGGAGATCTGTATAATGAGTGGACCGTGGAGTTGAAGGCAATGGCTGACCGTATTATCAGCATGCGTCAACAATTTTTTGATGCTTTGCAGGCCAGAGGTACACCTGGTGATTGGAGTCACATCATCAAGCAGATTGGAATGTTCACTTTCACTGGTTTGAACCCAGAGCAAGTTGCCTTCATGACTCAAGAGTACCATATTTATATGACATCTGACGGGAGGATTAGCATGGCTGGTCTGAGCGCCAAGACAGTCCCTCATTTGGCAGATGCGATACATGCGGCTGTAACTCGAATTGCCTG 1265 0.4775 MAYSDSISASPTAAVHGDSVFAHLVRAPEDPILGVTVAYNKDQSPVKLNLGVGAYRTEEGKPLVLNVVRRVEQQLLNDKARNKEYLPIVGLADFNKLSAKLILGADSPAIQENRVTTVQCLSGTGSLRVGGEFLAKHYHQRIVYLPQPTWGNHPKVFTLAGLSVKTYRYYAPATRGLDFEGLLEDIGSAPSGSIILLHACAHNPTGVDPSPDQWEQIRQLIRSKALLPFFDSAYQGFASGSLDADAQPVRLFAADGGEMLVAQSYAKNMGLYGERVGALSIVCKSADVAIRVESQVKLVIRPMYSNPPIHGASIVAAILKDGDLYNEWTVELKAMADRIISMRQQFFDALQARGTPGDWSHIIKQIGMFTFTGLNPEQVAFMTQEYHIYMTSDGRISMAGLSAKTVPHLADAIHAAVTRIA 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02533 421 CDD AAT_like 48 404 - -
Bva06g02533 421 Gene3D - 80 321 IPR015421 GO:0003824
Bva06g02533 421 PANTHER ASPARTATE AMINOTRANSFERASE 18 421 - -
Bva06g02533 421 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 264 277 IPR004838 GO:0003824|GO:0009058|GO:0030170
Bva06g02533 421 Gene3D Aspartate Aminotransferase, domain 1 26 413 IPR015422 GO:0003824
Bva06g02533 421 ProSiteProfiles catalase family profile. 26 421 IPR018028 GO:0004096|GO:0006979|GO:0020037
Bva06g02533 421 SUPERFAMILY PLP-dependent transferases 19 420 IPR015424 -
Bva06g02533 421 PRINTS Aspartate aminotransferase signature 226 238 IPR000796 GO:0006520|GO:0008483
Bva06g02533 421 PRINTS Aspartate aminotransferase signature 294 319 IPR000796 GO:0006520|GO:0008483
Bva06g02533 421 PRINTS Aspartate aminotransferase signature 195 214 IPR000796 GO:0006520|GO:0008483
Bva06g02533 421 PRINTS Aspartate aminotransferase signature 362 380 IPR000796 GO:0006520|GO:0008483
Bva06g02533 421 Pfam Aminotransferase class I and II 47 413 IPR004839 GO:0009058|GO:0030170
Bva06g02533 421 PANTHER ASPARTATE AMINOTRANSFERASE 18 421 IPR000796 GO:0006520|GO:0008483
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02533 Bva-Chr6 16042467 16046520 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02533 K14454 - mnt:21390673 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02533 06 16042467 16046520 Bva06g02533 06 16042467 16046520 ECH