Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02526 ATGGCTCCACCAGCACAGTCTCAGCGATATCCCTCACCGTCACAACCATCCGGCAAAGGTGAAGTCTCAGATCTTAAATCACAGCTTCGGCAGCTTGCTGGGAGCCGAGCTCCAGGGGTTGACGATTCAAAGCGCGAGCTCTTCAAGAAGGTTATTTCCTACATGACAATTGGTATTGATGTCTCATCTCTCTTTGGTGAGATGGTGATGTGCTCAGCAACATCAGACATTGTCCTAAAGAAAATGTGTTACCTATATGTTGGGAATTATGCAAAGGTCAATCCTGATCTTGCACTTTTGACGATTAATTTTCTACAAAGAGATTGCAAAGATCAAGATCCAATGATTCGGGGACTAGCGTTGAGGAGCTTGTGTTCACTACGAGTGGCAAACTTGGTGGAGTATTTGGTTGGGCCTTTAGGATTGGGGTTAAAGGATAGTAATAGTTATGTGAGGAAGGTGGCAGTTAATGGGGTTCTAAAACTTTATCATATATCAGCTTCCACATGCATTGATGCAGATTTTCCAGCAACTCTAAAGTATTTGATGCTTAACGACCCTGATACACAGGTTGTTGCAAATTGTTTGTCTGCCTTACAAGAGATTTGGACCTTAGAGGCAAGCACATCAGAGGAAGCAGCTAGGGAGAGAGAAACTCTGCTTAGCAAGTCAATTGTGTATTACTTTCTGAATCGAATTAAGGAATTTAGTGAATGGGCACAATGTCTTCTGCTGGAGCTGGCGGCCAAGTATGTTCCCTCCGATAGCAACGAAATATTTGACATCATGAATCTTCTTGAAGATAGACTCCAGCACGCAAATGGTGCTGTTGTCTTGGCAGctatcaaaatatttctacAATTGACTTTGTCTATGTCTGATGTTCATCATCAggTATATGAGCGCATTAAATCTCCTCTGTTAACTCTAGTGAGTTCTGGAAGTCCAGAACAATCCTATGCAGTTCTAAGCCATCTGCATCTCTTGGTGATGCGTGCACCTTATATATTTTCCTCAGACTACAAACACTTCTATTGTCAGTATAATGAGCCATCTTATGTCAAAAAGTTGAAGCTTGAAATGTTGACTGCAGTTGCAAATGAAAGCAACACCTATGAGATAGTAACGGAATTATGTGAATATGCTGCCAATGTTGACATTCCAATTGCAAGGGAGTCAATTCGAGCTGTTGGGAAGATAGCATTGCAGCAGTATGATGTCAATGCCATTGTTGATCGCCTTTTGCAGTTTCTAGAGATGGAAAAGGACTATGTTACTGCTGAAGCTCTGGTGCTTGTGAAAGATCTGCTTAGAAAATATCCCCAGTGGAGTCAGGATTGTATTGCTGTAGTTGGGAATATCAGCAGCAAAAATGTTCAAGCGCCTAAAGCCAAAGCAGCTCTTATATGGATGCTGGGAGAATATTCTCAGGACATGCATGATGCTCCTTATGTCTTGGAGAGCTTAATTGAAAATTGGGATGAGGAGCATTCTGCTGAGGTTCGCTTACATCTTCTCACCGCAGTTATGAAGTGTTTCTTTAAGAGACCACCCGAGACTCAGAAAGCACTGGGAGCTGCATTAGCTGCTGGTCTTACTGATTTTCACCAGGATGTTCATGATAGGGCCTTATTGTATTACAGGCTTCTGCAATACAATGTATCAGTGGCAGAACGCGTGGTGAATCCTCCAAAACAAGCAGTCTCTGTCTTTGCTGATACTCAGAGCAGTGAAATCAAAGATCGCatatttgatgaatttaaCAGTTTGTCTGTTGTATACCAAAAGCCTTCTTACATGTTTATTGATAAAGAACACCGGGGACCATTTGAGTTTTCAGATGAACTTGGAAATTTATCTATTAGTGCAGAACCTGCGGATACTGTTGTTCCAGCGCAGAGAGTGGCAGAAAACGACAAGGATTTGCTTCTAAGTGTTTCAGAAAAAGAGGATGGTAGAGATCCAAGTGGCAACGGTTTTGCCTATAGTGCTCCTTCCTACAATGCATCTGCCCCCGTATCTGGTCCAGCCCCGGCATCTAGTTTCGCAATTGATGATCTCCTTGGTTTAGGTTTTCCTTCTGGAACCGCAGCTACTCCTTCATCTCCTCCTTTGAGACTCAATCCAAAAGCTAATTTGGATCCTGGAACATTTCAGCAGAAATGGCGCCAACTGCCTATTTCTTTATCGCAGGAATATTCGATAAGTCCTCAAGGAGTTGCCGCACTGACAGCTCCCCACGCACTCCTCCAGCACATGCAAGGTCATGCGATCCACTGCATTGCATCAGGTGGTCAATCCCCCAACTtcaagttctttttctttggtcaAAAAGCGGAAGAAGAATCAACGTTCCTTGTTGAGTGTATAATCAACACATCGTCGGCCAAGTCACAGATTAAGATAAAAGCTGATGACCAAAGTTCATCCCAGGCATTCTCAACATTGTTCCAATCAGCTCTATCCAAATTTGTTTTGCCTTA 2483 0.4221 MAPPAQSQRYPSPSQPSGKGEVSDLKSQLRQLAGSRAPGVDDSKRELFKKVISYMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDQDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDSNSYVRKVAVNGVLKLYHISASTCIDADFPATLKYLMLNDPDTQVVANCLSALQEIWTLEASTSEEAARERETLLSKSIVYYFLNRIKEFSEWAQCLLLELAAKYVPSDSNEIFDIMNLLEDRLQHANGAVVLAAIKIFLQLTLSMSDVHHQVYERIKSPLLTLVSSGSPEQSYAVLSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSQDCIAVVGNISSKNVQAPKAKAALIWMLGEYSQDMHDAPYVLESLIENWDEEHSAEVRLHLLTAVMKCFFKRPPETQKALGAALAAGLTDFHQDVHDRALLYYRLLQYNVSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQKPSYMFIDKEHRGPFEFSDELGNLSISAEPADTVVPAQRVAENDKDLLLSVSEKEDGRDPSGNGFAYSAPSYNASAPVSGPAPASSFAIDDLLGLGFPSGTAATPSSPPLRLNPKANLDPGTFQQKWRQLPISLSQEYSISPQGVAALTAPHALLQHMQGHAIHCIASGGQSPNFKFFFFGQKAEEESTFLVECIINTSSAKSQIKIKADDQSSSQAFSTLFQSALSKFVLP 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02526 827 Gene3D - 14 608 IPR011989 -
Bva06g02526 827 SMART B2_adapt_app_C_2 705 822 IPR015151 GO:0006886|GO:0016192|GO:0030131
Bva06g02526 827 Pfam Beta2-adaptin appendage, C-terminal sub-domain 708 821 IPR015151 GO:0006886|GO:0016192|GO:0030131
Bva06g02526 827 Gene3D - 694 825 IPR012295 -
Bva06g02526 827 PIRSF Beta_adaptin 11 827 IPR016342 GO:0015031|GO:0030276
Bva06g02526 827 MobiDBLite consensus disorder prediction 1 26 - -
Bva06g02526 827 Pfam Adaptin N terminal region 37 551 IPR002553 GO:0006886|GO:0016192|GO:0030117
Bva06g02526 827 PANTHER AP-4 COMPLEX SUBUNIT BETA-1 16 824 - -
Bva06g02526 827 MobiDBLite consensus disorder prediction 11 26 - -
Bva06g02526 827 SUPERFAMILY ARM repeat 27 598 IPR016024 -
Bva06g02526 827 PANTHER ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER 16 824 IPR026739 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02526 Bva-Chr6 16004628 16011443 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02526 - - gmx:100801153 1420.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02526 06 16004628 16011443 Bva06g02526 06 16004628 16011443 ECH