Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02522 ATGGCAGAAACAGGCCAAGAAGAGACAATTGAATTCAAATGGGgtaaaaggaaaggaattgGTGGCAAAAAGAAGGATGtgcaattttataaatcttttacCTACGATGGTGTGGAGTACGACCTGTATGACTCTGTATATCTTTACAATGAAGGTGAACCTGAGCCTTATATCGGtaaactcataaaaatatgGGAGAATGCTGATAAGTCCAAGAAAGTTAAGGTTCTATGGTTTTTTCGTCCTTGCGAGATACTAAATTTCCTGGGGACAAATGAGACATGTGACAATGAATTGTTTTTGGCGGCTGGTGCAGGCACAGGCCTTGCAAATGTCAATCCTTTGGAAGCCATCTGTGGAAAATGCAATGTTATTTGCATTTCTAAGGACAGCAGGAATAGGCCACCCTCAGATGAAGAAGTTGAAACGGCTGAGTTTGTATTCTCTCGTTTCTTTGATGTTGGGCACCGTAGGATTTTGGATAAGATAGATTATGACGAGATTGCTGGAACGGAAGttaaatttttatttaacaaattagaTAGTGAAAAGCCTGCTGAGGTTGTCAAACTTGGTCtagacaagaaagaaattaatgcaTTAGAAAGTAATGAAGTGGTGGCTCCTCCTTCTGGTCAAGAGAAGAAGGAGCATGTAGTTGAGAAGGCAGATGACCATTTTGCTGATGTGTTAGCTAGTGAAAATGCTGATTTGGAGCTTTCATTGTctaaacaaaattcttttttgggaGCAAAACCGACCTTAGGGGTAGGTGTAGAGGAAGTACTTGAATCTAATGATGGACTGCAGAACTTGCTCGGTGGCAAGACTGAGCAACAAGCTAAAGTTAAAAGAAGTGGAGTTTCTAAACCCTCTTTCATTAAGGAAAAACCTTCTCGTGGACAACTAGATGCTTCTACAACACGTTTGGAATTGAGGGAAACAACTAAAAGTCATGAAGGGAACATCTCTAGTGATCAGACCAAAATGTCAAAGGTTGATTCTAAAGGGGGCAAACATCATGTTGGTGCGGATCATGTTGGACAATTGAAGGTTGAAAGAGATGTTAAATCTACGAAGAAAAATGGTGTGGCGGAGAGCAAGCTTTCTAAGGAAGCAAAACTTGGTGATTCTAGTGATATTTCTAATGATAAGGACAATAACAATGGGAAAAAGCGAAGAATCATTTGTGACAACAATGAGGATGATGATGACAAAAACATGAAGACCTTAGCTCCGTGCATTATCTCATCTAAAGATAAATGTGGAATGGATGTCAAATCTACTATGAATAAAGATGGCATGATGGAGAGCAAGCTTTCTAAGAAAGCAAAACTTGGcaattctcataaaatttctACTGAGAAGGACAATAATAATGAGAAAAGCCCAAGACTCATTTGTGACAACAATGAGGATGACAAGACTTTAGCTCCACGTGTTAACTTTAAACGTGGAAAAGATTCTTGTGATGTAGAGCAAGGCCCTTCGAAGAAGTTGAAGCATGATAAGAAGCCAATACTTGCTGATGGCAAGTTTTCTAAAGAATCTCCTACGGCCTCTCCAAGTGCAGAACGCAAATTAGATTGTGGTGTGACGGAAGTTACACGAAGACATGATGTTGATAGAAGCAAATGGTTTAGAATTcCTTGGGaggaaagaatgaaaaatgctCATGATCAAGGAAGACTTGTGCTGTTTCAAAACTTGAGTCCATCAATGACCTCAAAAGAGGTAGAGGATATAGTTTGGCACGGCTTCAAAGAGAGTTGTACTGCAAAGATGATGCAGGCAACTGCATTTTCTAGCCCTCATTCTGGTCAGgcttttgttatatttaaaacaaaggcAGGGGCGGAGATGGTTATTAGAAAATTGGACCAAGGTTGTTTATTATTGTCAAATGGGCGTCCCCTCGTTGCAATCATTGGACATCCTTGCTTCCCAGAAAAGAGGCCAATATTTCATGGCCATCTTTCTATTGAACAATttcgaagccaaatgcaacGCGAGATGAAAGATGCTGTCTCTACTTCACATTGTTCTCAATCTAACAATATTGAATATGATATGGCCATGGAATGGTGCTTACTACAAGAAAGAGCAGACCTCGCATGGAAAAGATTATACCAGcGACATGGTGAGGAGTTGAGAAAGCTAAAGGCAAagctaaaatcaaaatg 2183 0.3683 MAETGQEETIEFKWGKRKGIGGKKKDVQFYKSFTYDGVEYDLYDSVYLYNEGEPEPYIGKLIKIWENADKSKKVKVLWFFRPCEILNFLGTNETCDNELFLAAGAGTGLANVNPLEAICGKCNVICISKDSRNRPPSDEEVETAEFVFSRFFDVGHRRILDKIDYDEIAGTEVKFLFNKLDSEKPAEVVKLGLDKKEINALESNEVVAPPSGQEKKEHVVEKADDHFADVLASENADLELSLSKQNSFLGAKPTLGVGVEEVLESNDGLQNLLGGKTEQQAKVKRSGVSKPSFIKEKPSRGQLDASTTRLELRETTKSHEGNISSDQTKMSKVDSKGGKHHVGADHVGQLKVERDVKSTKKNGVAESKLSKEAKLGDSSDISNDKDNNNGKKRRIICDNNEDDDDKNMKTLAPCIISSKDKCGMDVKSTMNKDGMMESKLSKKAKLGNSHKISTEKDNNNEKSPRLICDNNEDDKTLAPRVNFKRGKDSCDVEQGPSKKLKHDKKPILADGKFSKESPTASPSAERKLDCGVTEVTRRHDVDRSKWFRIPWEERMKNAHDQGRLVLFQNLSPSMTSKEVEDIVWHGFKESCTAKMMQATAFSSPHSGQAFVIFKTKAGAEMVIRKLDQGCLLLSNGRPLVAIIGHPCFPEKRPIFHGHLSIEQFRSQMQREMKDAVSTSHCSQSNNIEYDMAMEWCLLQERADLAWKRLYQRHGEELRKLKAKLKSK 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02522 727 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 563 646 IPR000504 GO:0003723
Bva06g02522 727 MobiDBLite consensus disorder prediction 332 409 - -
Bva06g02522 727 CDD RRM_SF 565 639 - -
Bva06g02522 727 ProSiteProfiles BAH domain profile. 38 163 IPR001025 GO:0003682
Bva06g02522 727 PANTHER PROTEIN ANTI-SILENCING 1 364 726 - -
Bva06g02522 727 PANTHER PROTEIN ANTI-SILENCING 1 1 392 - -
Bva06g02522 727 Gene3D - 549 641 IPR012677 -
Bva06g02522 727 Gene3D - 7 161 IPR043151 -
Bva06g02522 727 MobiDBLite consensus disorder prediction 425 528 - -
Bva06g02522 727 MobiDBLite consensus disorder prediction 277 410 - -
Bva06g02522 727 SMART BAH_4 38 164 IPR001025 GO:0003682
Bva06g02522 727 MobiDBLite consensus disorder prediction 436 511 - -
Bva06g02522 727 PANTHER PROTEIN ANTI-SILENCING 1 1 392 - -
Bva06g02522 727 PANTHER PROTEIN ANTI-SILENCING 1 364 726 - -
Bva06g02522 727 SUPERFAMILY RNA-binding domain, RBD 544 640 IPR035979 GO:0003676
Bva06g02522 727 Pfam BAH domain 39 153 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02522 Bva-Chr6 15968320 15976818 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02522 - - lang:109328093 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02522 06 15968320 15976818 Bva06g02522 06 15968320 15976818 ECH