Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02508 ATGAGGATTGAGCAGGATAGCGATGGAGTTTCGGCATCCAGGAAGCACTTGGTCTTTGCTTACTATGTCACTGGTCATGGTTTTGGTCATGCCACTCGTGTTATTGAGGTAGTGCGCCATCTGATCCATGCTGGGCATGATGTGCATGTCGTTACGGGCGCTCCTCACTTTGTTTTCACCTCAGAAATACAGTCTCCTCGCCTCTTCATTCGGAAGGTGCTTTTGGATTGTGGAGCAGTTCAAGCAGATGCCTTGACCGTAGATCGCCTTGCATCTTTGGAGAAGTATTCTGAGACGGCTGTGAAACCCCGGGCCACCATCTTGGCTAAAGAAATAGAGTGGCTGAACTCTATCAAAGCTGACTTAGTGGTCTCTGATGTTGTCCCAGTTGCATGTCGTGCGGCCGCAGATGCTGGCATTCGATCAGTTTGTGTTACCAACTTCAGTTGGGACTTCATCTATGCGGAGTATGTCATGGCCGCTGGACTTCATCATCGTTCAATAGTTTGGCAGATAGCTGAGGATTATTCCCACTGTGAGTTCCTTATCCGCCTCCCAGGGTATTGCCCAATGCCTGCATTTCGCGATGTTATTGATGTACCTCTGGTTGTAAGGAGGTTGCACAAATCTCCAAAAGAGGTGAGGAATGAACTTGGAATTGAAGGCAACACGAAGGTCGTTATCCTCAACTTTGGTGGCCAGCCATCAGGATGGAAGTTAAAGGAAGAGTTCTTACCTTCTGGCTGGTTGTGCCTGGTTTGTGGTGCTTCTGATAGTCAGGACCTTccaaaaaatttcagaaaactAGCCAAAGACGCATACACGCCTGATATCATTGCAGCATCTGACTGTATGCTTGgAAAGATTGGATATGGCACTGTTAGTGAAGCCCTGGCATACAAATGTCCCTTTGTCTTTGTACGCAGAGATTATTTCAATGAAGAAccatttttgagaaatatgcTTGAgTATTATCAATGTGGTGTTGAAATGATTAGGAGGGATTTACTCACTGGTCACTGGAGACCTTATCTTGAACGGGCAATAAGTTTGAAACCATGCTATGACGCTGGCATTAATGGTGGTGAGGTGGCTGCTCACATCCTGCAGGAGACAGCTTTTGGAAAAAATTACGCGTCAGATAAGCTTAGTGGGGCAAGAAGATTGCGTGATGCCATAGTTCTTGGGTATCAACTACAAAGGGCCCCTGGACGAGACATTGCAATCCCAGAATGGTATGCAACTGCTGAAACCCAGCTTGGCATCTCATCCCCACCTGCTCATAACTTAAGCTCCCCATTCCAATCGCAGCTTGAAGACTTTGAGATTATTCATGGAGATGTTCAAGGTCTTCCAGATACCGTGGCTTTCTTAGAGAGCTTATCAGAACTTGATGAGAAGCACCATCTGACACGGGAGCAAAAGGCTGCTGCTAATATCTTCATTTGGGAGGAGGAAATTTTTGTGACTAGGGCTCCTGGACGGTTAGATGTGATGGGTGGTATAGCTGACTATTCTGGGAGCCTTGTCCTGCAGATGCCAATAAGAGAAGCCTGTCATGTTGCTCTCCAAAGAGTCCATCCAAGTAAACATAGGCTGTGGAAGCATGCCCAGGCTCGACAGAATGACAAAGGACCAAAACCAAGTGCTGTCTTGCAAATAGTATCATATGGCTCAGAGTTGAGCAATCGTGGCCCAACATTTGACATGGATTTGTCCGATTTTATGGATGGAGGAAGGCCAATCTCCTATGAAAAAGCAAAGGCATACTTTTCTCAAGATCCTTCCCAGAAGTGGGCAGCGTTTGTCGCTGGGGCAATTGTGGTTTTAATGCATGAATTTGGAGTGCGTTTTGAAGATAGTATCAGCATGCTGgtttcatCTGCAGTCCCCGAAGGGAAAGGAGTATCATCTTCTGCTGCTGTAGAGGTTGCTAGCATGTCGGCTATTGCAGCTGCTCAtgGACTGAGCATCAGTCCCAGAGATCTGGCCTTGCTCTGCCAGAAGGTGGAAAATCATATTGTAGGAGCTCCATGTGGTGTCATGGACCAGATGACTTCAGCATGCGGTGAAGCGGACAAACTTCTTGCAATGATTTGCCAGCCTGCTGAGATTGTTGGCCTTGTGGAAATTCCCAGCCATATTCGATTCTGGGGAATTGATTCTGGAATAAAACACAGTGTTGGAGGTGCCGACTATGGTTCTGTGAGAATTGGCACCTTTATGGGTCTAAAGATGGTAAAGTCCAGGGCGACTGAAGTATTGGCCGAGACATGTGCTAATGGGATGAACCGTGATGAAGTGGACAGAGACGATATagaattacttaaaaaagaagCCTCATTAGATTACTTATGCAATTTATCACCTCACAGATTCGAGGCCCTTTATGCCAAGACAATGCCCGAGTCCGTTACTGGTGGggattttttgaataaatacaCCAATCATAATGATCCTGTCACTGTTATTGATCAGAAGCGCACATATGTAGTGAGGTCTCCTACAATACATCCCATCTATGAAAATTTCCGAGTCAAGACCTTTAAAGCACTTCTGACATCAGCAACTTCAATTGATCAACTTGGAGCCCTTGGAGAGTTGCTATATCAGTGCCACTACAGCTACAGTGCTTGTGGACTTGGCTCTGATGGGACAGATAGGCTTGTCCAGTTGGTACAGGACTTGCAGCATAGCGCAGCATCTATATCTGAAGGTGGAACGTTATGCGGAGCGAAGATTACTGGTGGGGGCTCTGGTGGAACGGTTTGTGTAATTGGTAGGAATTGTCTCAAAAGCAGCGAACAAATTTTGGAGGTTCAGAGTAGATACAAAAAAGCCACAGGTTATTTGCCCTTTATATTTGAGGGCTCGTCCCCGGGTGTTGGCAAGTTTGGCTATCTGAAAATACGCCGAGGACGTGCTGCAAGTTA 2933 0.4535 MRIEQDSDGVSASRKHLVFAYYVTGHGFGHATRVIEVVRHLIHAGHDVHVVTGAPHFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVKPRATILAKEIEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGLHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSPKEVRNELGIEGNTKVVILNFGGQPSGWKLKEEFLPSGWLCLVCGASDSQDLPKNFRKLAKDAYTPDIIAASDCMLGKIGYGTVSEALAYKCPFVFVRRDYFNEEPFLRNMLEYYQCGVEMIRRDLLTGHWRPYLERAISLKPCYDAGINGGEVAAHILQETAFGKNYASDKLSGARRLRDAIVLGYQLQRAPGRDIAIPEWYATAETQLGISSPPAHNLSSPFQSQLEDFEIIHGDVQGLPDTVAFLESLSELDEKHHLTREQKAAANIFIWEEEIFVTRAPGRLDVMGGIADYSGSLVLQMPIREACHVALQRVHPSKHRLWKHAQARQNDKGPKPSAVLQIVSYGSELSNRGPTFDMDLSDFMDGGRPISYEKAKAYFSQDPSQKWAAFVAGAIVVLMHEFGVRFEDSISMLVSSAVPEGKGVSSSAAVEVASMSAIAAAHGLSISPRDLALLCQKVENHIVGAPCGVMDQMTSACGEADKLLAMICQPAEIVGLVEIPSHIRFWGIDSGIKHSVGGADYGSVRIGTFMGLKMVKSRATEVLAETCANGMNRDEVDRDDIELLKKEASLDYLCNLSPHRFEALYAKTMPESVTGGDFLNKYTNHNDPVTVIDQKRTYVVRSPTIHPIYENFRVKTFKALLTSATSIDQLGALGELLYQCHYSYSACGLGSDGTDRLVQLVQDLQHSAASISEGGTLCGAKITGGGSGGTVCVIGRNCLKSSEQILEVQSRYKKATGYLPFIFEGSSPGVGKFGYLKIRRGRAAS 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02508 977 Pfam Galactokinase galactose-binding signature 486 524 IPR019539 -
Bva06g02508 977 SUPERFAMILY GHMP Kinase, C-terminal domain 715 963 IPR036554 -
Bva06g02508 977 PIRSF Gal_kin_glcsltr 1 976 IPR012369 -
Bva06g02508 977 Gene3D - 817 949 IPR036554 -
Bva06g02508 977 PRINTS Mevalonate kinase family signature 628 650 - -
Bva06g02508 977 PRINTS Mevalonate kinase family signature 492 516 - -
Bva06g02508 977 PRINTS Mevalonate kinase family signature 911 928 - -
Bva06g02508 977 PRINTS Mevalonate kinase family signature 671 690 - -
Bva06g02508 977 PANTHER L-ARABINOKINASE 17 971 - -
Bva06g02508 977 SUPERFAMILY Ribosomal protein S5 domain 2-like 485 704 IPR020568 -
Bva06g02508 977 Pfam GHMP kinases N terminal domain 625 690 IPR006204 GO:0005524
Bva06g02508 977 Pfam GHMP kinases C terminal 861 945 IPR013750 -
Bva06g02508 977 Gene3D Glycogen Phosphorylase B; 208 350 - -
Bva06g02508 977 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 23 336 - -
Bva06g02508 977 PANTHER MEVALONATE KINASE/GALACTOKINASE 17 971 - -
Bva06g02508 977 Gene3D Glycogen Phosphorylase B; 11 168 - -
Bva06g02508 977 Gene3D - 467 718 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02508 Bva-Chr6 15898106 15910047 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02508 K12446 - gmx:100787860 1659.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02508 06 15898106 15910047 Bva06g02508 06 15898106 15910047 ECH