Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02506 ATGGATCAAAACTTCGATCTAAGCGCCCCTCATTCCATGGGGACTACAATCATTGGCGTCACTTACAACGGTGGTGTTGTTCTTGGAGCCGATTCTCGAACCAGCACTGGAGTATATGTTGCCAATCGGGCATCAGACAAAATCACACAGCTGACTGATAATGTCTATGTTTGTCGTTCTGGATCGGCTGCAGATTCTCAGATTGTCTCTGATTATGTGCGCTACTTCCTTCATCAACACACGATACAGCTCGGACGCCCTGCGACTGTCAAAGTTGCTGCGAACCTTGTTCGGCTTCTATCCTATAACAACAAGAATATGTTGCAAACTGGCTTAATTGTTGGTGGGTGGGACAAATTTGAAGGTGGACAAATTTTTGGAATCCCCCTGGGTGGAACAATAATACAGCAACCTTTTGCTATTGGAGGATCTGGGTCCAGTTACTTGTATGGATTTTTTGATCAAGCGTGGAAAGAAGGAATGACCAAGGAAGAAGCTGAGCAACTAGTAGTCAAGGCAGTTTCACTGGCCATTGCCCGTGATGGTGCTAGTGGTGGTGTTGTTCGTACTGTAATTATAAATTCTGAGGGAGTGACCAGAAATTTCTATCCTGGGGACACACTTCCAATTTGGCACGAGGAGTTGGAGGCTCAGAATTCGTTGTTGGACATACTTAATGCCTCCCCTAGTCCTGAGCCAATGAATATATA 710 0.4535 MDQNFDLSAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGRPATVKVAANLVRLLSYNNKNMLQTGLIVGGWDKFEGGQIFGIPLGGTIIQQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVIINSEGVTRNFYPGDTLPIWHEELEAQNSLLDILNASPSPEPMNI 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02506 236 ProSitePatterns Proteasome beta-type subunits signature. 18 65 IPR016050 GO:0005839|GO:0051603
Bva06g02506 236 ProSiteProfiles Proteasome beta-type subunit profile. 14 193 IPR023333 -
Bva06g02506 236 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 15 218 IPR029055 -
Bva06g02506 236 CDD proteasome_beta_type_6 15 202 - -
Bva06g02506 236 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 7 228 - -
Bva06g02506 236 PANTHER PROTEASOME SUBUNIT BETA 7 228 - -
Bva06g02506 236 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 11 216 IPR029055 -
Bva06g02506 236 PRINTS Proteasome component signature 22 37 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bva06g02506 236 PRINTS Proteasome component signature 179 190 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bva06g02506 236 PRINTS Proteasome component signature 154 165 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bva06g02506 236 PRINTS Proteasome component signature 143 154 IPR000243 GO:0004298|GO:0005839|GO:0051603
Bva06g02506 236 Pfam Proteasome subunit 13 193 IPR001353 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02506 Bva-Chr6 15891808 15894580 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02506 K02738 - dcr:108204699 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02506 06 15891808 15894580 Bva06g02506 06 15891808 15894580 ECH