Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02502 ATGGACATAGTGTCTCATGTGCCTCATTATGAAGCCAAGTATATAGATGACCATGACATTATGAAGATCCTTGCAGCTGAAGCTGTTGAATTCCTTTTATCTTCTGAGGGAAAGGTACCCTTGTCATCATGCAATGGGAAAAGCATCTGTCTTTTCTTCTCTGCAAACTGGTGCAGGCCTTGCAGAGCATTCATCCCCCATCTGGTTGAACTTTATGACACATTGAGAAAGAGGGGTGAAAGTCTAGAGATCATCTTCATCTCCTTTGACCGTGATGAGGATGGATTTAATGAACACTTGAAGAGTATGCCATGGCTGGCTGTCCCATTTGATGTAAATTTGCATAGAAGACTGATCAACAGGTACCGGGTTGATCGAATCCCATCATTCATCCCCTTATGTTCAGATGGCGTAACAGTTGAAGAAGACTTGATAGCATGCATTGAGGACTATGGTGCTGAAGCATTTCCCTTCACGAGGAAGAGACGTGAGGAATTGAAAGCCATAGATAAAAGAAAGCGCGAAGAAGTCAGTTTGGAAGAGCTATTGGTACACGACGGACGAAACTTTCTCATATCTGCAGATCATAAAAAGGTACCAGTATCTGAACTTGTAGGTAAAACAATAGGCCTCTACTTTTGCGCTCACTGGTCTCCTCCTTGCCGTGCCTTTACTGTACAACTTACAGAAGCATACAACAATCTCATGACTGCAAAAGATCGTCGCTTTGAGACTGTTCTGGTCTCAACAGATAGAGACCTCATGGAATTCAATATGAATTTAAGTACCATGCCATGGCTTGCTATCCCTTATGAGGACAGAACAAAGCATGACCTTTGTAGAATCTTTGATATCAAAGGAATTCCAGCTTTGGTTCTCATTGGACCAGATGGCAAAGTCATTACGATGAATGGGAAGTTTATGGTTTCCTCCTATGGTGCTGAAGCGTACCCATTCACCGAATCACGGATAAAAGACCTAGAAGCAGCTctgagaaaagaaggagaggCTTTACCTCATCAGGTTGAGGATGTGAAGCATGAGCATGTACTGAAGTTGGATATGGCCAAAGCATACGTCTGTGATTTCTGTAAAAGGCAGGGGAGGTTCTGGGCATTCTCTTGTGATGTCTGTGACTATGATCTTCATCCTAGTTGTGTAGAAAAGGTCAGCAAGGATGACTGTTTTCTACAAAATACAATTACAGCAACTCTGCCACCAGAGATATA 1229 0.4199 MDIVSHVPHYEAKYIDDHDIMKILAAEAVEFLLSSEGKVPLSSCNGKSICLFFSANWCRPCRAFIPHLVELYDTLRKRGESLEIIFISFDRDEDGFNEHLKSMPWLAVPFDVNLHRRLINRYRVDRIPSFIPLCSDGVTVEEDLIACIEDYGAEAFPFTRKRREELKAIDKRKREEVSLEELLVHDGRNFLISADHKKVPVSELVGKTIGLYFCAHWSPPCRAFTVQLTEAYNNLMTAKDRRFETVLVSTDRDLMEFNMNLSTMPWLAIPYEDRTKHDLCRIFDIKGIPALVLIGPDGKVITMNGKFMVSSYGAEAYPFTESRIKDLEAALRKEGEALPHQVEDVKHEHVLKLDMAKAYVCDFCKRQGRFWAFSCDVCDYDLHPSCVEKVSKDDCFLQNTITATLPPEI 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02502 409 SUPERFAMILY Cysteine-rich domain 339 388 IPR046349 -
Bva06g02502 409 Pfam Thioredoxin-like 206 300 IPR012336 -
Bva06g02502 409 Pfam Thioredoxin-like 46 137 IPR012336 -
Bva06g02502 409 SUPERFAMILY Thioredoxin-like 33 150 IPR036249 -
Bva06g02502 409 PANTHER NUCLEOREDOXIN 3-RELATED 8 389 - -
Bva06g02502 409 Gene3D Glutaredoxin 182 321 - -
Bva06g02502 409 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 346 395 IPR002219 -
Bva06g02502 409 SUPERFAMILY Thioredoxin-like 191 302 IPR036249 -
Bva06g02502 409 CDD TryX_like_TryX_NRX 189 319 IPR045870 GO:0004791
Bva06g02502 409 Pfam C1 domain 346 387 IPR004146 -
Bva06g02502 409 PANTHER THIOREDOXIN 8 389 - -
Bva06g02502 409 Gene3D Glutaredoxin 24 162 - -
Bva06g02502 409 ProSiteProfiles Thioredoxin domain profile. 168 329 IPR013766 -
Bva06g02502 409 ProSiteProfiles Thioredoxin domain profile. 20 153 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02502 Bva-Chr6 15873897 15875841 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02502 K17609 - gmx:100778160 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02502 06 15873897 15875841 Bva06g02502 06 15873897 15875841 ECH