Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02496 ATGTCGACAGGAGCAGCAccttataaaccaaaaaatattctcataaCTGGTGCAGCTGGTTTCATAGCCTCCCATGTCACCACCAGGCTAATCAAAAGCTACCCTCAATACAAGATTGTTGCTCTTGATAAGCTAGACTATTGCTCTACTTTCAAGAATTTGGAATCATGCTCTTCATCaccaaacttcaaatttatcaaggGTGATATTGCTAGTGTTGATATTGTGAACCACCTTTTGATAGAAGAGGATATAGACACCATTATGCACTTTGCTGCTCAAACCCATGTAGATAATTCTTTTGGTAACTCCATGGAATTCACCTACAATAACATATATGGAACCCATGTAATGCTTGAAGCCTGCAGGGTCACCAACTGCATAAAAAGGTTCATCCATGTTAGCACTGATGAAGTTTATGGTGAGACTGACTTAGAAACTGATGTTGGCAATCATGAAAAATGTCAACTTCTTCCCACAAATCCTTATTCTGCAACAAAAGCAGGAGCAGAAATGCTGGTCATGGCTTATCACAGGTCTTATGATCTTCCAGCCATCACTACTCGAGGCAATAATGTCTATGGTCCAAACCAATACCCTGAAAAGCTTATCCCAAAATTCATTCTTCTGGCCATGAGAGGTGAGAAATTGCCAATCCATGGCAATGGCTCAAATGTGAGGAGCTATCTTTATTCTGCAGATGTTGCAGAAGCATTTGATGTCATACTTCATAAAGGGGTGGTCGGCCATGTCTACAACATTGGCACCAAGAAGGAGAGGAGTGTCCAAGATGTGGCTCAAGATATTTGCAGCCTATTCAAATTGAATCCCAAAGAAGTTATTGAGTTTGTTCACGATAGGCCTTTCAATGACAAGAGATATTTTCTGGATGATCAAAAGCTGAAGAAGCTTGGATGGAAGGAAAGAACTCCTTGGGAAGTAGGACTTCAGATGACAATTGACTGGTATAAGAAAAACCCAGATTGGTGGGGTGATGTATCCACTGCTTTACACCCTCATCCACGTTTCTCAGCAATGAACCTCTCTGATGAAGCTGCATGGTCTTTTCAGTGTGGATATTCAAGATTGGCAAGGTCATTTACTGATGTTAATCGTAGTTCAGGAGGATTGAAGTTCTTGATTTATGGCAGAACTGGTTGGATAGGAGGGTTGTTAGGAAAGCTTTGCAGTGAAGAGAAAATAGCCTGGGAATATGGGAATGGAAGAATTCAAGACAGGAAATCACTGTTGGAGGATATAAGTAGAATCAAGCCAACACACGTGTTAAATGCAGCTGGTGTTACTGGAAGGCCTAATGTGGATTGGTGTGAGTCACACAAAGTTGAAACAATAAGGACTAATGTAGTTGGGACATTAACCCTGGCTGATGTTTGTAAGGAACAAGGGATTCACATGACCAATTTTGCAACTGGTTGCATATTTGAGTATGATAAGGACCATCCTCTTAAGTCGGGCATTGGCTTCAAAGAGGAGGATAAGCCAAATTTCATTTGTTCCTTCTATTCAAAGACCAAAGCCAtgGTGGAGGAGCTTttgaaagaatatgaaaatgtcTGCACACTCAGAGTTAGAATGCCAATATCATCAGATCTCAACAACCCAAGAAACTTCATCACAAAGATTTCTCGTTATAACAAGGTGGTGAACATTCCAAATAGCATGACAGTGCTAGATGAGCTCCTACCCATATCCATTCTGATGGCTAAGAAGAAGTTAACAGGGATATGGAACTTCACAAACCCAGGCGTCATAAGCCACAATGAGATCTTAGAGTTATACAGGGAATACATAGACCCGAAATTCAAATGGGAAAATTTTAGTTTGGAAGAACAGGGAAAGGTAATTGTTGCTCCCAGGAGTAACAATGAAATGGATGCAGCCAAGCTCAGGAAGGAGTTTCCAGGTTTGTTGCCCATCAGAGAATCCATAATCAAGTTTGTCTTTGAGCCTAACAAGAAAACTTG 1985 0.3975 MSTGAAPYKPKNILITGAAGFIASHVTTRLIKSYPQYKIVALDKLDYCSTFKNLESCSSSPNFKFIKGDIASVDIVNHLLIEEDIDTIMHFAAQTHVDNSFGNSMEFTYNNIYGTHVMLEACRVTNCIKRFIHVSTDEVYGETDLETDVGNHEKCQLLPTNPYSATKAGAEMLVMAYHRSYDLPAITTRGNNVYGPNQYPEKLIPKFILLAMRGEKLPIHGNGSNVRSYLYSADVAEAFDVILHKGVVGHVYNIGTKKERSVQDVAQDICSLFKLNPKEVIEFVHDRPFNDKRYFLDDQKLKKLGWKERTPWEVGLQMTIDWYKKNPDWWGDVSTALHPHPRFSAMNLSDEAAWSFQCGYSRLARSFTDVNRSSGGLKFLIYGRTGWIGGLLGKLCSEEKIAWEYGNGRIQDRKSLLEDISRIKPTHVLNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCKEQGIHMTNFATGCIFEYDKDHPLKSGIGFKEEDKPNFICSFYSKTKAMVEELLKEYENVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISILMAKKKLTGIWNFTNPGVISHNEILELYREYIDPKFKWENFSLEEQGKVIVAPRSNNEMDAAKLRKEFPGLLPIRESIIKFVFEPNKKT 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02496 661 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 376 650 IPR036291 -
Bva06g02496 661 CDD dTDP_GD_SDR_e 11 328 IPR005888 GO:0008460|GO:0009225
Bva06g02496 661 CDD dTDP_HR_like_SDR_e 378 650 - -
Bva06g02496 661 Pfam RmlD substrate binding domain 378 548 IPR029903 -
Bva06g02496 661 Gene3D - 13 317 - -
Bva06g02496 661 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 337 IPR036291 -
Bva06g02496 661 Pfam GDP-mannose 4,6 dehydratase 14 318 IPR016040 -
Bva06g02496 661 PANTHER TRIFUNCTIONAL UDP-GLUCOSE 4,6-DEHYDRATASE/UDP-4-KETO-6-DEOXY-D-GLUCOSE 3,5-EPIMERASE/UDP-4-KETO-L-RHAMNOSE-REDUCTASE RHM3-LIKE 1 659 - -
Bva06g02496 661 Gene3D - 370 661 - -
Bva06g02496 661 Gene3D - 204 326 - -
Bva06g02496 661 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 1 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02496 Bva-Chr6 15850266 15852994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02496 12 323 Miscellaneous Gene Families AT1G02000 25.373 1.12e-19 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02496 K12450 - gmx:100776241 1191.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02496 06 15850266 15852994 Bva06g02496 06 15850266 15852994 ECH