Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02495 ATGGAGAAATCTGGACGGCAATTCGACGTGATTATCGTCGGAGCAGGCGTAATGGGAAGCTCCACCGCTTACCAAACCGCTCAGAGGGGCCTGAAAACCCTTTTGCTGGAGCAGTTTGACTTGTTGCACCACCGTGGCTCCTCCCATGGTGAGTCTCGCACCATACGAGCCACTTACACTCAGCATTACTACTACCCTTTGGTCATGGAATCCTACGACCTCTGGCTACAGGCCGAGGCCCAAATCGGCTACAAGGTCTACTTCAAGGCTCCTCATTTGGACATGGGCCGTGAAGACGATGACAACCTCCTCGCCCTCATCCACAATAGCCGCAGACACTCCGTCCCCCACCAAGTCCTCCGCCGCCACCAGGTCGCCCAGAAATTCTCCGGCCTCATTGACATACCGGAGGATTGGATTGGGGTTTTCAACGAGCTAGGTGGTGTCATAAAGCCCACAAAAGCCGTGGCCATGTTCCAAACACTAGCTTACAAGAATGGTGCCGTACTACAGGACAACACGGAGGTTACAAATATTAAGAAAGACAACGTCAGAGGTGGCGTTGTTGTTTCTACAGCCAATGGTGAAAGCTTTTGGAGTAAAAAATGCGTGGTTACTGTTGGCGCCTGGATGAAAAAGTTAGTTAAAACGGTTACTAGGCTTGAATTGCCTATACAGCCCATGGAGACTCATGTTTGTTACTGGAGGATCAAGGAAGGGCACGAAGGGAAATATGCTATTGGCGGCGATTTTCCGACGTTTGCGAGCTACGGGAAGGTTTATGTGTATGGAACTCCGAGTCTAGAGTACCCTGGTTTGATTAAGGTGGCCGTGCACGGAGGGAACCCATGTGACCCGGATAAGAGGCCATGGGGCCCCGGAGTGGCTTTAGATTCACTGAAAGAATGGGTTGAGGGCAGACTCTTGGGGATGGTGGATTCCGGCGAGCCTGCCATGAAGCAGTGTTGCATGTACTCCATGACACCGGACGAGGATTTTGTGATTGATTTCTTGGGTGAGGAGTTTCAGAAAGATGTGGTCATCGGTGGTGGGTTTTCGGGTCATGGGTTCAAGATGGCTCCGGTGATGGGGCGGATATTGGCTGACATGGTGGTTCATGGGGAGGCAAATGGGGTAGATATTAAAAACTTCAGCATTTCAAGGTTTAAGAATAATCCTCAAGCCACTTATTCTTATCCGTTATGTTA 1208 0.5058 MEKSGRQFDVIIVGAGVMGSSTAYQTAQRGLKTLLLEQFDLLHHRGSSHGESRTIRATYTQHYYYPLVMESYDLWLQAEAQIGYKVYFKAPHLDMGREDDDNLLALIHNSRRHSVPHQVLRRHQVAQKFSGLIDIPEDWIGVFNELGGVIKPTKAVAMFQTLAYKNGAVLQDNTEVTNIKKDNVRGGVVVSTANGESFWSKKCVVTVGAWMKKLVKTVTRLELPIQPMETHVCYWRIKEGHEGKYAIGGDFPTFASYGKVYVYGTPSLEYPGLIKVAVHGGNPCDPDKRPWGPGVALDSLKEWVEGRLLGMVDSGEPAMKQCCMYSMTPDEDFVIDFLGEEFQKDVVIGGGFSGHGFKMAPVMGRILADMVVHGEANGVDIKNFSISRFKNNPQATYSYPLC 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02495 402 Pfam FAD dependent oxidoreductase 9 370 IPR006076 GO:0016491
Bva06g02495 402 Gene3D - 8 375 IPR036188 -
Bva06g02495 402 SUPERFAMILY FAD-linked reductases, C-terminal domain 226 329 - -
Bva06g02495 402 TIGRFAM soxA_mon: sarcosine oxidase, monomeric form 8 395 IPR006281 GO:0008115
Bva06g02495 402 PANTHER PEROXISOMAL SARCOSINE OXIDASE 5 395 IPR045170 GO:0016491|GO:0050660
Bva06g02495 402 SUPERFAMILY FAD/NAD(P)-binding domain 7 390 IPR036188 -
Bva06g02495 402 Gene3D - 91 327 - -
Bva06g02495 402 PANTHER PEROXISOMAL SARCOSINE OXIDASE 5 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02495 Bva-Chr6 15847598 15848987 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02495 K00306 - qsu:112007577 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02495 06 15847598 15848987 Bva06g02495 06 15847598 15848987 ECH