Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02489 ATGGCAATTCCCAAGCCACTGTTACCTGAAGAACATAGTGAATccgagaaagaaagaaacaagattAGTTGTGAGCCTTTGATTCCTGGGTTACCGAATGAAATCGCGGAGCTGtgtcttcttcatcttccGTACCCGTACCAAGCTCTGGTGCGCTCTGTTTCTTCATCGTGGAACAGAGTCATCACAGACCCAACCTTCCTCCTCTCAAGGAAATCTCTTTCACTCTCTTTGCCTTATCTCTTCGTGTTCGCCTTTCACAAACCAACGGCAAGGATTCAATGGCAATCGCTGGACCCTCGATCAGGCCGTTGGTTTGTACTACCTGACATGCCCTCTCCAAAGGAAGTTTGTCCACCCGCTTTTGCATGCGCCTCGCTACAACGTCAGGGGAAGCTCTTCGTCATTGGTGGTATGCGGTCCGACACGGAAACTTCCATGCAGACTACGATCATGTACCGTACATCAACAAATAAATGGTCCATAGCATCATCAATGCCAACCGCGCGATCATTTTTTGCGGCAAAGAGCGTGAACGGAAAAATCGTAGCTGTTGGAGGAAGTGGGACCAGCGCCGGCGACTCAATTAGAGCAGTGGAAGTCTACGATCCAGAAAAGGACACGTGGACCAGCGCTGCTAGGATAGACACCTGCCTGGCCCTGTACGATTCCGCCGTGGTGGGGAACAAGATGTACGTGACGGAAGGGTGGACATGGCCGTTCATCTTTTCACCGAGGGGTGCGGCGTACGATGCAGATAGGGACAGTTGGCAAGAGATGAAGCAGGGGATGAGAGAAGGGTGGACGGGGTTGAGCGCGGTGGTGGGTAACAGAGTGTTGGTGCTATCGGAATACGGGGACTGTCCAGTGAAGGTGTACGATGAGGAGGAGGACACGTGGCATTACGTGGGTGGGGACAGATTCCCAAGGGAGAAAATGCAGAGGCCATTCGCTGTGAATGCAGCGGAAGGAAGAATTTACGTGGTGTCGTGTGGATTGAATGTGGCAATTGGGAGCGTAGTGTTTGAAGAAGACAAAGGGAAACAAGTTGTAAAGGTGATGTGGGAGGTGATGGAGGCACCAAAGGCATTCGGGGACCTCTCACCGTCTAATTGCCAGGTTCTATATGCTTG 1133 0.5013 MAIPKPLLPEEHSESEKERNKISCEPLIPGLPNEIAELCLLHLPYPYQALVRSVSSSWNRVITDPTFLLSRKSLSLSLPYLFVFAFHKPTARIQWQSLDPRSGRWFVLPDMPSPKEVCPPAFACASLQRQGKLFVIGGMRSDTETSMQTTIMYRTSTNKWSIASSMPTARSFFAAKSVNGKIVAVGGSGTSAGDSIRAVEVYDPEKDTWTSAARIDTCLALYDSAVVGNKMYVTEGWTWPFIFSPRGAAYDADRDSWQEMKQGMREGWTGLSAVVGNRVLVLSEYGDCPVKVYDEEEDTWHYVGGDRFPREKMQRPFAVNAAEGRIYVVSCGLNVAIGSVVFEEDKGKQVVKVMWEVMEAPKAFGDLSPSNCQVLYA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02489 377 Pfam F-box domain 30 67 IPR001810 GO:0005515
Bva06g02489 377 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 12 377 - -
Bva06g02489 377 Pfam Kelch motif 129 167 IPR006652 GO:0005515
Bva06g02489 377 Pfam Kelch motif 169 213 IPR006652 GO:0005515
Bva06g02489 377 SUPERFAMILY F-box domain 26 98 IPR036047 GO:0005515
Bva06g02489 377 Gene3D - 72 348 IPR015915 GO:0005515
Bva06g02489 377 PANTHER F-BOX PROTEIN AFR 12 377 - -
Bva06g02489 377 SMART kelc_smart 181 229 IPR006652 GO:0005515
Bva06g02489 377 SMART kelc_smart 132 180 IPR006652 GO:0005515
Bva06g02489 377 SUPERFAMILY Kelch motif 80 332 IPR015915 GO:0005515
Bva06g02489 377 SMART fbox_2 31 71 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02489 Bva-Chr6 15815111 15817307 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02489 - - zju:107406193 541.576