Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02444 ATGCTTAAGCAAATTCTGAGTAGGCTTCCTCGGAAGTCATCGAAATCTGACCCGGACGAGTCATGCCGGGGCGACTCTTCTCGGTCCAACTCCTCACGGGTCGGTTCACCTCGTGTCGCCAGCAGGAGTGACCGGTCACAAGGTGGGAGTTCCTCTTCAAGTCGATCTAACACTGCGAAACGTACTTCTTCATCGGCGGTCTTTCCAGCAAGCATCGTCTCTGGGATCGAACCCTTGGTGCCATTTAAAGATGTGCCTAATGGAGAGAAGATGAATCTATTTGTTAGCAAGTTGAGCCTTTGTTGTGTTACATTTGATTTTACTGACCCTGGTAAGAATACCATGGAGAAAGATATCAAAAGGCAAACTTTACTTGAACTTGTTGATTTTGTGGAGTCTGGGTCGATGAAATTCAGTGACCCTGCTATTCTTGCTATGTGCAGAATGTGTGCTATTAATCTCTTCAGAGTTTTCCCGCCTAATTATCGGTCTAATGGGGGTGGTGCTGGTGGTgagaatgatgatgatgaaccAGTATTTGATCCTGCTTGGCCACATTTACAGATTGTGTATGATTTGCTGCTTAAATTCATTACTTCTTCGTGCCTTGACGCTAAGGTAGCGAAGAAGTATTTTGACCATTCATTTATCTCGAAATTGCTTGGCTTGTTTGATTCAGAGGATCCAAGAGAAAGAGACTGCTTGAAGACAATTCTGCATAGGGTTTATGGGAAGTTCATGGTGCATAGACCCTACATTCGGAAATCCATAAACCATTTGTTCCATCGGTTTGTGATGGAGACTGAGAGACGCAATGGAATTGCTGAGTTATTGGAGATTTTTGGGAGCGTAATTAGTGGTTTTGCTTTACCTTTAAAAGAGGAACacaaaatcttcttgtggAGGGTTCTAATCCCCTTGCATAAGCCCAAATCCATGGGGATTTATTTTCAGCAATTGACGTACTGTGTTACTCAATTTATAGAGAAGGAACCGAAGTTGGCAAGCACTGTGATAAGGGGTTTGTTAAAATATTGGCCAATAACAAATAGTCAGAAAGAGGTGATGTTCCTGGGTGAAGTGGAAGAGATATTGGAAGTAATCAACATGGTAGAATTCCAGAGGGTCATGGTTCCATTGTTTTGGCGGATTGGGTGCTGCATTAACAGTTTACACTTCCAGGTAGCTGAAAGGGCACTTTTCTTATGGAACAATGACCATATCGTCAACTTGATTGCGCATAATCGTCAAGTGATCCTGCCCATCATATTTCCAGCTTTAGAAAAGAACTCTCAGAACCACTGGAACCAGGCAGTGCTTAACTTAACCCTTAATGTTAAAAAGATGTTTATGGAAATGGATGAGAAGCTCTTCTTATCTTGTCATTCTCACTTCAAAGAGGAAGAAGCAATTTTAACCTTGGCGGCTGAGAAGCGAAAGCAAGCGTGGGAACAACTAGAGCACGTAGCCAGTCGCCAGCCTGTAATTGGAAATACTGCCGTTTTAGTGTCTCATTG 1517 0.4206 MLKQILSRLPRKSSKSDPDESCRGDSSRSNSSRVGSPRVASRSDRSQGGSSSSSRSNTAKRTSSSAVFPASIVSGIEPLVPFKDVPNGEKMNLFVSKLSLCCVTFDFTDPGKNTMEKDIKRQTLLELVDFVESGSMKFSDPAILAMCRMCAINLFRVFPPNYRSNGGGAGGENDDDEPVFDPAWPHLQIVYDLLLKFITSSCLDAKVAKKYFDHSFISKLLGLFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKSINHLFHRFVMETERRNGIAELLEIFGSVISGFALPLKEEHKIFLWRVLIPLHKPKSMGIYFQQLTYCVTQFIEKEPKLASTVIRGLLKYWPITNSQKEVMFLGEVEEILEVINMVEFQRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALEKNSQNHWNQAVLNLTLNVKKMFMEMDEKLFLSCHSHFKEEEAILTLAAEKRKQAWEQLEHVASRQPVIGNTAVLVSH 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02444 505 PIRSF PP2A_B56 3 503 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bva06g02444 505 MobiDBLite consensus disorder prediction 1 62 - -
Bva06g02444 505 MobiDBLite consensus disorder prediction 10 26 - -
Bva06g02444 505 Gene3D - 86 489 IPR011989 -
Bva06g02444 505 MobiDBLite consensus disorder prediction 27 62 - -
Bva06g02444 505 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 81 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bva06g02444 505 SUPERFAMILY ARM repeat 92 484 IPR016024 -
Bva06g02444 505 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 504 - -
Bva06g02444 505 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 504 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02444 Bva-Chr6 15617980 15621368 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02444 K11584 - gmx:100775273 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00322 10 3968816 3971860 Bva06g02444 06 15617980 15621368 BWGD
Bva06g02444 06 15617980 15621368 Bva06g02444 06 15617980 15621368 ECH
Bva10g00322 10 3968816 3971860 Bva06g02444 06 15617980 15621368 ECH