Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02437 ATGAACAAAGAGTCGAATCAAGGGTTGGTGCCTCATACAGACAAAAGCAGCTTAACCATTCTATGCCAAAATGAAGTGCAGGGACTTGAGGTGCTATCTAAACAAGGCAAATGGATTCCCTTAAACATCCCTCGTGGAGTTTTTGTGGTTATCGTTGGTGATGTCCTCAAGGCATGGAGCAACGGCAGACTTCATGCAGTTACACACAGAGTGATGATGAGGGGAGACAAAGACAGATACTCCATTGGCTTCTTTGCAGTGCCTAAGGAAGAAATGGAGATTGAGGTACCCCACGAGTTGGTTGATGAACAACATCCTCTGCTCTATCACCCATTCAAGTATGGACAATACTTCTATTACTATGCTTCAACTCTCAGAGAGGATGCACTACAAGTATTTGCAGGTGTTTA 410 0.439 MNKESNQGLVPHTDKSSLTILCQNEVQGLEVLSKQGKWIPLNIPRGVFVVIVGDVLKAWSNGRLHAVTHRVMMRGDKDRYSIGFFAVPKEEMEIEVPHELVDEQHPLLYHPFKYGQYFYYYASTLREDALQVFAGV 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02437 136 Pfam 2OG-Fe(II) oxygenase superfamily 4 86 IPR044861 -
Bva06g02437 136 Gene3D - 1 120 IPR027443 -
Bva06g02437 136 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 1 88 IPR005123 -
Bva06g02437 136 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 135 - -
Bva06g02437 136 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 2 135 - -
Bva06g02437 136 SUPERFAMILY Clavaminate synthase-like 4 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02437 Bva-Chr6 15592555 15592965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02437 8 117 Glycosyltransferase AT5G59530 32.743 4.08e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02437 - - gmx:100817159 201.83