Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02417 ATGAGATTCAAAAAGGGAAGTAAAGTGGAGATCCTTAGCAATAGAGAGGTACCTTCTGGGGAATGGCGCCTTGCTGAAATTATCTCTGGTAATAGGCATACTTATAGCGTCCAGTACGATTGTTCTAGCATAACAAACGAGGCAATTGTGGAGAGAGTTCCAAGGAAGGTCATCAGGCCTTGTCCCCCTCTTGTAAAAGGTGgagatttttatttggtaagGTTGATAGGATCTTGCAAGGAGTTCCAAGTTCACAAGTCTAGCATGAGGGCTCGTCAGTCGTGGCAAGATGAACAGTGGATTGTAATGCCAAAGGGTGCTGGCAATTGTGGAGTTGGAAAGTCCATCAGGAATTTTAGTCTAAACAGTTATAAGATGATCCCTGAAGTTCAGCTAGCTAATACTGAAATAAAGCTGCAGGCCAGAAAAGATTGTTTGCCTGGACAAGTTCACAGTGGTCTCCGGGAGTCTCACCCTGTCTCATCCACAACGTTGAAGAGACCAACCCCATACTGCTCCTCTCCTATTGAGGTGTGCCGAAGAAAGATGAGAGCTATTGTGAATAATGGAGAGTGTCAAAGATTCGTCTCAGTGTCTCCAACCCTCTTGCCGGAAAAGGTAGATGCTGTTGCTTACCCACATAAAAATATGGGTGAAAAATGCATGGATGCTTCCTATAATAATGGACCAACTCAATATTATGAAACGGGGAAGGAGACCCCTAATAATGATATCACATATTTTCATGAAAGACGTGAAGAGTCTAATGATTCTGATAGTGATGAGTGTTCAGTTGGCAGCTGTAGTGTGATAAGTAATGGTTCATACATGTCATCTAGTGATACTTTAGCAGGTCCTTACCACGATGCAGATACCCTTTGTAGCGAGGCAGAGTCTTTAGACGTCGGAGACGAGGAAGAAAGATGCCCGCCTTATCCAAAAGAGGATGTAGCAGCAAGAATCCATAGGTTAGAGTTGCATGCCTATCGCAAAACTCTTGAGGCAATGTATGCTTCAGGTCCCTTAACTTGGGAACAAGAAGTGCTACTGACTAATCTTCGTATGTCACTCCATATTTCAAATGATGAATATTTGATTGAGATACGGAACTTACTTTCTTCTGGTCAGCgtattta 1136 0.4234 MRFKKGSKVEILSNREVPSGEWRLAEIISGNRHTYSVQYDCSSITNEAIVERVPRKVIRPCPPLVKGGDFYLVRLIGSCKEFQVHKSSMRARQSWQDEQWIVMPKGAGNCGVGKSIRNFSLNSYKMIPEVQLANTEIKLQARKDCLPGQVHSGLRESHPVSSTTLKRPTPYCSSPIEVCRRKMRAIVNNGECQRFVSVSPTLLPEKVDAVAYPHKNMGEKCMDASYNNGPTQYYETGKETPNNDITYFHERREESNDSDSDECSVGSCSVISNGSYMSSSDTLAGPYHDADTLCSEAESLDVGDEEERCPPYPKEDVAARIHRLELHAYRKTLEAMYASGPLTWEQEVLLTNLRMSLHISNDEYLIEIRNLLSSGQRI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02417 378 Pfam ENT domain 320 370 IPR005491 -
Bva06g02417 378 SMART ENT_2 317 376 IPR005491 -
Bva06g02417 378 PANTHER PLANT TUDOR-LIKE RNA-BINDING PROTEIN 67 255 - -
Bva06g02417 378 Pfam Agenet domain 6 63 IPR008395 -
Bva06g02417 378 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 317 378 IPR005491 -
Bva06g02417 378 PANTHER PLANT TUDOR-LIKE RNA-BINDING PROTEIN 1 65 - -
Bva06g02417 378 SUPERFAMILY ENT-like 312 373 IPR036142 -
Bva06g02417 378 Gene3D ENT domain 311 376 IPR036142 -
Bva06g02417 378 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 67 255 - -
Bva06g02417 378 SMART agenet_At_2 1 66 IPR014002 -
Bva06g02417 378 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02417 Bva-Chr6 15501996 15505568 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02417 - - gmx:100812171 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02417 06 15501996 15505568 Bva06g02417 06 15501996 15505568 ECH