Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02416 ATGGCAAATGCCTCTGACGGCGCCTGCCGCGAGCCATGGAGGGTCCTCGAGTTTTACAGTGGGATCGGTGGCATGAGGTATTCGCTGATGAAAGCTGGCGTAAATGCGAAAGTAGTAGAAgcatttgaaattaatgaCAAAGCAAACGACGTTTACCAGCATAATTTTGGTCATCGTCCTTTTCAGCGAAATATTCAAAGCCTGACTGCTGCTGATCTTGACAGCTATAGAGCAGATGCATGGCTTCTTTCTCCTCCTTGCCAACCTTACACAAGACAAGGTCTGCAGAAGGATACTGGTGATGCCCgggcattttcttttctccagaTTCTTGAACTTATGCAACTCATATTGCGGCCTCCGAGTATGTTATTTGTAGAAAACGTTGTTGGATTTGAGACATCTGATACACGTGCAAAGATGATTGAAAtgttagaaaaaacaaattttatcacaCAGGAGTTTATTCTGAGCCCATTACAGTTTGGAATCCCATATTCGAGGCCTCGTTATTTTTGTCTGgCAAAGAGGAAACCTTCATCTTTTAGGAATGGACTTTTTAATTACCAGCTGATTCAATCTCCAAGACCATTATTTGATCACGGTGATACAATGTCTTATGAAGATGATCCCTCGCAAGAGGACTATGATAATTTGCTTCAGTCATGTGAACCAATTGAGaaatttcttgaattaaagaaaaatgaaacaaatgtTGAATCTGATTCTTTAAGAGCTGGCTTATATGAGGATGGCCTTTCAACTTTGGGGAAAGATGTTGATCATGAATGTGATGTCACGTCTTCAGACCAGTATGTTGTTCCCTTGAGCTTGATAGAGAGGTGGGGGAGTGCTATGGATGTTGTCTATCCTGATTCAAAGCGCTGCTGCTGTTTTACAAAAAGTTATTTCAGATATGTGAAGGGAACTGGATCCCTTTTGGCAACAGTTCAGCCAAAGAAGAAGGGTAAAGACTCACTAAAGGAGCAAGGCCTTAGATTTTTTACCCCAAGAGAGGTTGCAAATTTACATTCTTTTCCCGAAGATTTTGAATTCCCACAGCACATAAGTCTCAGACAGCGGTATGCATTGCTGGGGAACAGTTTAAGCATAGGAGTTGTAGCTCCCTTACTCCGGCATCTTTTTACTGATCCATTGTG 1160 0.394 MANASDGACREPWRVLEFYSGIGGMRYSLMKAGVNAKVVEAFEINDKANDVYQHNFGHRPFQRNIQSLTAADLDSYRADAWLLSPPCQPYTRQGLQKDTGDARAFSFLQILELMQLILRPPSMLFVENVVGFETSDTRAKMIEMLEKTNFITQEFILSPLQFGIPYSRPRYFCLAKRKPSSFRNGLFNYQLIQSPRPLFDHGDTMSYEDDPSQEDYDNLLQSCEPIEKFLELKKNETNVESDSLRAGLYEDGLSTLGKDVDHECDVTSSDQYVVPLSLIERWGSAMDVVYPDSKRCCCFTKSYFRYVKGTGSLLATVQPKKKGKDSLKEQGLRFFTPREVANLHSFPEDFEFPQHISLRQRYALLGNSLSIGVVAPLLRHLFTDPL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02416 386 Pfam C-5 cytosine-specific DNA methylase 14 381 IPR001525 GO:0008168
Bva06g02416 386 TIGRFAM dcm: DNA (cytosine-5-)-methyltransferase 16 376 IPR001525 GO:0008168
Bva06g02416 386 ProSiteProfiles C-5 cytosine-specific DNA methylase (Dnmt) domain profile. 13 386 IPR001525 GO:0008168
Bva06g02416 386 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 382 IPR029063 -
Bva06g02416 386 Gene3D DNA Methylase, subunit A, domain 2 249 369 - -
Bva06g02416 386 Gene3D Vaccinia Virus protein VP39 6 190 IPR029063 -
Bva06g02416 386 PRINTS Cytosine-specific DNA methyltransferase signature 14 30 IPR001525 GO:0008168
Bva06g02416 386 PRINTS Cytosine-specific DNA methyltransferase signature 163 176 IPR001525 GO:0008168
Bva06g02416 386 PRINTS Cytosine-specific DNA methyltransferase signature 120 134 IPR001525 GO:0008168
Bva06g02416 386 PANTHER TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASE 11 384 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02416 K15336 - gmx:100792567 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02416 06 15497922 15501324 Bva06g02416 06 15497922 15501324 ECH