Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02408 ATGGAAGGGACTGGTTCCAATGGAGAAGAACTGCAAATGGTTGATGATGCTCGACAACCTTTAAGCCGTGTCGTGCCAATTCCTTCGTCTCACTTGACTCCTTATCGTGTTGTAATCATACTCCGACTTATTATTCTGGGCTTCTTCTTGCAATACCGTGCAACTCACCCTGTGAAAGATGCATATCCCTTGTGGTTGACATCAGTTATCTGTGAGATTTGGTTTGCCTTATCCTGGCTCTTGGATCAGTTTCCAAAGTGGTCTCCTATTAATCGTGAGACCTACCTTGAAAGGCTTGCTCTAAGaTATGATCGTGAAGGAGAACCATCACAGTTAGCTCCAGTAGATGTTTTTGTTAGTACAGTGGATCCTCTCAAAGAGCCTCCTCTTATAACTGCAAACACTGTATTATCCATACTTGCTGTTGATTACCCTGTGGACAAGGTTTCCTGCTATGTTTCAGATGATGGTTCAGCTATGTTGACCTTTGAAGCCCTTTCTGAAACAGCTGAGTTTGCAAAGAAGTGGGTGCCGTTTTGCAAAAAGCATAATATTGAGCCAAGAGCCCCTGAGTTTTATTTTGCCCAGAAGATCGATTACTTGAGGGACAAGATCCAACCTTCTTTTGTGAAGGAGCGTCGAGCAATGAAGAGGGAATATGAAGAATTTAAAGTACGGATCAATGCCTTGGTAGCCAAAGCTCAGAAGATGCCAGAAGAAGGTTGGACAATGCAGGATGGTACTGCATGGCCTGGAAATAATCCACGGGATCATCCTGGAATGATTCAGGTGTTCTTAGGTCATAGTGGAGGACTTGATACGGATGGAAATGAGCTACCTAGACTAGTTTATGTTTCTCGTGAGAAGAGACCAGGCTTCCAGCATCACAAGAAAGCGGGAGCTATGAATGCTTTGATTCGAGTTTCAGCTGTCTTGACCAATGGTGCATATCTTCTGAACGTTGACTGTGATCACTATTTCAATAATAGCAAAGCTCTTAAAGAAGCCATGTGTTTCATGATGGATCCTGTTCTTGGAAAGAAGACATGCTATGTACAATTCCCACAGCGGTTTGATGGCATTGATTTGCATGATCGATATGCCAATCGAAATATTGTGTTCTTTGATATCAACTTGAAAGGATTGGATGGCATTCAAGGCCCAGTCTATGTAGGAACTGGTTGTTGTTTCAATAGGCAGGCTCTATATGGTTATGACCCTGTTTTGACCGAGGAAGATTTGGAGCCTAACATTATTGTGAAGAGTTGCTGGGGTTccagaaagaaaggaaggggTACTAATAAGAATTACGTTGACAAGAAGAGGGCAGCGAAAAGAACTGAATCTACCATTCCCATCTTTAATATGGAAGACATAGAGGAGGGCGTTGAAGgTTATGATGATGAGAGGTCGCTTCTGATATCTCAGAAGAGCCTGGAAAAACGTTTTGGGCAGTCCCCAGTTTTTATTGCGGCCACTTTCATGGAGCAGGGTGGCATTCCACCTTCGACTAACCCTGCAACTCTTTTAAAGGAGGCAATCCATGTTATCAGTTGTGGTTATGAAGACAAGACAGAATGGGGCAAAGAGATTGGATGGATCTACGGTTCTGTGACTGAAGATATCTTGACTGGGTTTAAGATGCATGCTCGTGGTTGGATTTCCATCTATTGTATGCCGCCTCGTCCTGCATTCAAGGGTTCTGCCCCCATCAATCTTTCTGATCGTCTCAATCAGGTTCTTCGGTGGGCCTTGGGTTCAATTGAAATTTTCCTTAGTAGGCATTGCCCCTTGTGGTATGGCTACAATGGGAGATTGAAGACGCTGCAGAGGCTGGCTTATATTAATACTATTGTCTACCCGCTTACCTCAATCCCATTGATTGCTTATTGTATGCTTCCAGCATTCTGCCTTctcacaaataaatttattattcccGAGATCAGCAACTTCGCCAGTATGTGGTTCATCCTCCTCTTCGCTTCTATTTTTGTTACTTCAATTCTTGAGCTTAGATGGAGCGGAGTGAGCATAGAAGACTGGTGGAGGAATGAGCAGTTCTGGGTTATTGGTGGTACATCTGCTCATCTTTTTGCTGTATTCCAAGGGCTTCTGAAGGTGCTCGCCGGAATTGATACAAATTTCACCGTGACGTCAAAGGCAGCGGATGAAGATGGGGATTTTGCAGAGCTTTATGTGTTTAAATGGACATCACTTCTTATCCCTCCTACAACAGTACTCATTGTGAACTTGGTAGGTATTGTTGCAGGTGTTTCGTACGCCATAAACAGTGGCTACCAATCTTGGGGACCTCTATTTGGTAAGCTATTTTTTGCCATATGGGTCATTGCCCATCTGTACCCATTCTTGAAGGGTTTGTTGGGCCGCCAAAACCGTACGCCCACAATTGTTATTGTTTGGTCCATTCTTCTTGCTTCCATATTCTCCTTGCTGTGGGTTAGGATCGACCCCTTCACCACTGACGCTACTAAAGCTACTGCCAATGGTCAGTGTGGCATCAACTGCTA 2528 0.4324 MEGTGSNGEELQMVDDARQPLSRVVPIPSSHLTPYRVVIILRLIILGFFLQYRATHPVKDAYPLWLTSVICEIWFALSWLLDQFPKWSPINRETYLERLALRYDREGEPSQLAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAKKWVPFCKKHNIEPRAPEFYFAQKIDYLRDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTAWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPVLGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCWGSRKKGRGTNKNYVDKKRAAKRTESTIPIFNMEDIEEGVEGYDDERSLLISQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRLKTLQRLAYINTIVYPLTSIPLIAYCMLPAFCLLTNKFIIPEISNFASMWFILLFASIFVTSILELRWSGVSIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAADEDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTTDATKATANGQCGINC 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02408 842 Pfam Cellulose synthase 115 833 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva06g02408 842 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 4 842 - -
Bva06g02408 842 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 273 415 IPR029044 -
Bva06g02408 842 SUPERFAMILY Nucleotide-diphospho-sugar transferases 133 415 IPR029044 -
Bva06g02408 842 Coils Coil 213 233 - -
Bva06g02408 842 PANTHER CELLULOSE SYNTHASE 4 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02408 Bva-Chr6 15457136 15461959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02408 1 840 Glycosyltransferase AT4G32410 88.823 0.0 1557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02408 K10999 - zju:107421191 1666.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02408 06 15457136 15461959 Bva06g02408 06 15457136 15461959 ECH