Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02406 ATGGGTGGGAGAAGGAATCAAGTATTTGATGAGAAAAGAGATGGCTTTTTGTCTATCTGCGATTTGGGTTCTCAATGGAGTCTCCAAGAGGGATATTACCATCCCGGTGGATTATTTGCCTGCGTCGGCCAGATGGGAATGGGAGTTGGTATTCAGCCCAACCCTTCTTCTAATTCCAATTCCCGAGACAATGGTGGCTTGAAAGTTCCCTATACCGATTTGTACGTGAAGTATGTGTCTTCACAGGGAAAATTTCAGATTGTTGGAATTCCAGAGGAGGAAGGgattgagaagaagaaaaggggtggcctgaaattgaaaattaagataaaaaatccTTCCTTTAGGAGGTTGGTTAGTGGCGCCATAGCTGGTGCAGTGTCCCGCACCGCGGTGGCACCTTTGGAGACTATAAGGACCCATTTGATGGTGGGAAGTAGTGGCCATTCTACCACTGAGGTGTTCCACGATATTATGAAGACCGATGGGTGGAAGGGACTGTTTAGGGGCAATCTAGTTAACGTGATTCGGGTTGCACCTAGTAAGGCCATAGAGCTGTTTGCATATGACACAGTGAACAAGAATCTATCGCCAAAACCGGGGGAGCAGCCCAAACTTCCCATTCCTGCATCATTGATTGCCGGGGCCTGTGCTGGAGTTAGTTCAACCATATGCACATATCCTCTCGAGTTAGTAAAGACTCGACTAACTATACAGAGAGGTGTTTACAAAGGTCTCCTCGATGCATTCATAAAAATAGTTAGGGAAGAGGGTCCGGCAGAACTTTATAGAGGCCTTGCTCCCAGTCTTATTGGAGTGATCCCATATGCAGCCACCAATTACTTTGCTTATGACACTTTACGGAAAGCGTACCGAAAAATCTTTAAGCAAGAAAAGATTGGCAACATTGAAACCCTCTTAATTGGATCTGCAGCTGGAGCTTTTTCAAGTAGTGCTACTTTTCCACTTGAGGTAGCTCGCAAGCATATGCAAGTGGGAGCTCTCAGTGGAAGACAGGTTTACCAGAATGTCATTCATGCCCTTGCAAGCATACTTGAACATGAAGGGATCTCGGGTTTATACAGAGGGCTGGGGCCTAGCTGCATGAAGTTGGTACCAGCAGCTGGAATATCTTTCATGTGCTATGAAGCCTGCAAGAGGATACTCGTAGAAAATGATGACGAAGAATA 1190 0.4412 MGGRRNQVFDEKRDGFLSICDLGSQWSLQEGYYHPGGLFACVGQMGMGVGIQPNPSSNSNSRDNGGLKVPYTDLYVKYVSSQGKFQIVGIPEEEGIEKKKRGGLKLKIKIKNPSFRRLVSGAIAGAVSRTAVAPLETIRTHLMVGSSGHSTTEVFHDIMKTDGWKGLFRGNLVNVIRVAPSKAIELFAYDTVNKNLSPKPGEQPKLPIPASLIAGACAGVSSTICTYPLELVKTRLTIQRGVYKGLLDAFIKIVREEGPAELYRGLAPSLIGVIPYAATNYFAYDTLRKAYRKIFKQEKIGNIETLLIGSAAGAFSSSATFPLEVARKHMQVGALSGRQVYQNVIHALASILEHEGISGLYRGLGPSCMKLVPAAGISFMCYEACKRILVENDDEE 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02406 396 PANTHER SOLUTE CARRIER FAMILY 25 27 394 - -
Bva06g02406 396 Gene3D Mitochondrial carrier domain 109 394 IPR023395 -
Bva06g02406 396 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 27 394 - -
Bva06g02406 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 300 388 IPR018108 -
Bva06g02406 396 PRINTS Mitochondrial carrier protein signature 263 281 IPR002067 GO:0055085
Bva06g02406 396 PRINTS Mitochondrial carrier protein signature 170 190 IPR002067 GO:0055085
Bva06g02406 396 PRINTS Mitochondrial carrier protein signature 309 331 IPR002067 GO:0055085
Bva06g02406 396 PRINTS Mitochondrial carrier protein signature 130 144 IPR002067 GO:0055085
Bva06g02406 396 PRINTS Mitochondrial carrier protein signature 221 239 IPR002067 GO:0055085
Bva06g02406 396 PRINTS Mitochondrial carrier protein signature 117 130 IPR002067 GO:0055085
Bva06g02406 396 Pfam Mitochondrial carrier protein 113 196 IPR018108 -
Bva06g02406 396 Pfam Mitochondrial carrier protein 206 293 IPR018108 -
Bva06g02406 396 Pfam Mitochondrial carrier protein 300 392 IPR018108 -
Bva06g02406 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 290 IPR018108 -
Bva06g02406 396 SUPERFAMILY Mitochondrial carrier 113 384 IPR023395 -
Bva06g02406 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 195 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02406 Bva-Chr6 15452787 15455721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02406 1 395 Organic Solute Cotransporters AT4G32400 68.434 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02406 K14684 - jre:108985127 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00363 10 4179653 4182642 Bva06g02406 06 15452787 15455721 BWGD
Bva06g02406 06 15452787 15455721 Bva06g02406 06 15452787 15455721 ECH