Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02381 ATGGCTATACTCTACGCTCTGGTGGCGAGGGGATCGGTGGTTCTGGCCGAGTACAGTGCCACGCCGACTAACGCCAGCACGATTGCGCGCCAGATATTGGAAAAGATACCAGGCAACAATGACACCCACGTATCTTACTCTCAGGATCGCTATATTTTCCACGTTAAGCGCACCGATGGCCTCACCGTCCTCTGCATGGCCGATGACACCGCCGGCAGGAGAATTCCTTTTGCATTTCTTGAAGATATTCACCAGAAATTTGCGAGGACTTATGGGCGTGCAGTTCATTCAGCAAGTGCTTATGGGATGAATGATGAGTTTTCAAGAATTTTGAGCCAGCAAATGGAATCTTACTCAAATGATCCAAATGCTGATAGGATAAATCGACTAAAAGGTGAAATGAATCAGGTAAGAAATGTGATGATAGAAAACATCGACAAAGTTTTAGATAGAGGTGATCGGCTCGAATTGCTGGTGGATAAAACTGCCAATTTGCAAGGAAACACCTTCCGATTCAGAAAGCAAGCTCGCCGTTTCAGAAGTACAGTCTGGTGGAGAAATGTCAAGCTTACGGTCGCACTTATAGTCCTTCTTCTGGTGATAGTTTATGTTGTACTGGCTTTTGTTTGCCATGGGCTTGCACTACCATCTTGCTTGAAGTG 662 0.4577 MAILYALVARGSVVLAEYSATPTNASTIARQILEKIPGNNDTHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQKFARTYGRAVHSASAYGMNDEFSRILSQQMESYSNDPNADRINRLKGEMNQVRNVMIENIDKVLDRGDRLELLVDKTANLQGNTFRFRKQARRFRSTVWWRNVKLTVALIVLLLVIVYVVLAFVCHGLALPSCLK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02381 220 PRINTS Synaptobrevin signature 151 170 IPR001388 GO:0016021|GO:0016192
Bva06g02381 220 PRINTS Synaptobrevin signature 187 206 IPR001388 GO:0016021|GO:0016192
Bva06g02381 220 PRINTS Synaptobrevin signature 131 150 IPR001388 GO:0016021|GO:0016192
Bva06g02381 220 PANTHER SNARE PROTEINS 1 218 - -
Bva06g02381 220 CDD R-SNARE 125 184 - -
Bva06g02381 220 Gene3D Longin domain 1 124 - -
Bva06g02381 220 SMART Longin_2 28 110 IPR010908 -
Bva06g02381 220 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-RELATED 1 218 - -
Bva06g02381 220 CDD Longin 4 118 IPR010908 -
Bva06g02381 220 Pfam Synaptobrevin 124 211 IPR042855 -
Bva06g02381 220 ProSiteProfiles v-SNARE coiled-coil homology domain profile. 126 186 IPR042855 -
Bva06g02381 220 ProSiteProfiles Longin domain profile. 7 111 IPR010908 -
Bva06g02381 220 SUPERFAMILY SNARE fusion complex 120 187 - -
Bva06g02381 220 Gene3D - 125 210 - -
Bva06g02381 220 Pfam Regulated-SNARE-like domain 29 108 IPR010908 -
Bva06g02381 220 ProSitePatterns Synaptobrevin signature. 144 163 IPR001388 GO:0016021|GO:0016192
Bva06g02381 220 SUPERFAMILY SNARE-like 3 118 IPR011012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02381 Bva-Chr6 15343061 15346216 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02381 1 219 Miscellaneous Gene Families AT5G11150 78.182 6.23e-138 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02381 K08515 - pvy:116138049 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02381 06 15343061 15346216 Bva06g02381 06 15343061 15346216 ECH