Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02376 ATGGGCTTCTTCAGTGGTTTGATCATTGGCATTGTCCTTGGTATTGGCTTGATCGTCGCTTTTGCTCGTTATGAAAGTAAGAGAGCCAGGCGTCGTTCCGATTTGGCAAAGACTATCGCAGCATTTGCGAGAATGACGGTGGAGGATTCGAGAAAAATTCTCCCTCCTAAGTGGTATCCATCATGGTTGGTTTGGCTTAATAAACACCTTGAGAAAATTTGGCCTTATGTCGATGAGGCAGCATCGGAGTTGATAAGAAGCAATGTGGAGCCCATTCTCGAACAGTATAGGCCAATTATATTATCTGCACTCACATTTTCGAAGTTGACTCTTGGTACAGTTGCTCCACAATTTACAGGCATTTCAATTGTAGAAGAGGAAAGTGGAGTTGATGGAGTGATCATGGAGATAGAAATGCAGTGGGATGGTAACCCAAATATCGTTCTTGACATTAAAACCCGAGTTGGTGTTGCATTACCTATACAGGTAAAAGATATTGCATTCACTGGGGTTTTCAGGTTGATCTTCAAACCACTAGTAGGTGAATTTCCTGCTTTTGGAGCAGTTTCCTTTTCCTTGAGAGAAAAGAAAAATCTGGATTTTACTCTTAAGGTCATTGGTGGTGATATATCTTCTCTCCCAGGGATATCTGATGTTTTGGAGGAAACAATTCGGGATGCCATTGAAGATTCTATAACATGGCCAGTACGCAAAATCATACCTATTATACCTGGGGATTACAGTGATCTGGAACTGAAACCGGTTGGAACTCTAGAAGTGAAGTTAGTGCAAGCGAAGGACTTAATGAATAAAGATCTGATCGGCAAATCCGATCCTTTTGCGGTGTTATTTGTACGTCCGCTTCGTGACAGAACCCAAACCAGCAAAACTATTAATAACCAATTAAATCCAGTATGGAACGAGCACTTTGAGTTCGTTGTTGAGGATATATCTACACAGCACTTGACTATAAGAGTTTTTGATGATGAAGGCATTCAGGCTGCTGAGCTAATTGGTTGTGCACAAGTGCGGCTCATGGACCTTGAACCTGGTAAAGTCAAGGATGTGTGGCTCAAACTCGTTAAGGATTTAGAGATtcgaagagaaaataaaaacagggGTGAGGTGCACGTGGAGCTCTTGTACTGCCCATATGGTGTTGAGAACAGCTTTAAAAACCCTTTCGACCCTGATTACTCGTTAACCTCGTTCGAAAAGGCCCTTAAGAGTGGAGCCAATGAGGAAGGGGCTAACGAACTTCGAGGATCAGGACCACAGAAGAAAAGTAATGTGATTGTAAGAGGGGTATTATCCGTGACGGTGATATCTGCTGAAGACTTGCCATCAGTGGACTTCATGGGCAAGGCCGACCCTTATGTAGTCCTCAGTTTGAAAAAATCtgagaaaaaattcaagactAGGGTTGTAAATGAAAACTTAAATCCAGTTTGGAATCAAACATTTGACTTTGTTGTGGAGGATGGTGTACATGAGATGCTAATTCTTGAAGTCTGGGATCATGATACTTTTGGGAAGAACAAAATTGGAAGAGTGTTAGTGACACTCACAAGGGTCCTCATAGAAGGGGAAGTTCAGGGAACATTTCCCATAGATGGCTCTAAATCAGGGACGCTGACTTTTCATCTCAAGTGGACACCACAGCACAAGTATCGGGATTCTTA 1682 0.415 MGFFSGLIIGIVLGIGLIVAFARYESKRARRRSDLAKTIAAFARMTVEDSRKILPPKWYPSWLVWLNKHLEKIWPYVDEAASELIRSNVEPILEQYRPIILSALTFSKLTLGTVAPQFTGISIVEEESGVDGVIMEIEMQWDGNPNIVLDIKTRVGVALPIQVKDIAFTGVFRLIFKPLVGEFPAFGAVSFSLREKKNLDFTLKVIGGDISSLPGISDVLEETIRDAIEDSITWPVRKIIPIIPGDYSDLELKPVGTLEVKLVQAKDLMNKDLIGKSDPFAVLFVRPLRDRTQTSKTINNQLNPVWNEHFEFVVEDISTQHLTIRVFDDEGIQAAELIGCAQVRLMDLEPGKVKDVWLKLVKDLEIRRENKNRGEVHVELLYCPYGVENSFKNPFDPDYSLTSFEKALKSGANEEGANELRGSGPQKKSNVIVRGVLSVTVISAEDLPSVDFMGKADPYVVLSLKKSEKKFKTRVVNENLNPVWNQTFDFVVEDGVHEMLILEVWDHDTFGKNKIGRVLVTLTRVLIEGEVQGTFPIDGSKSGTLTFHLKWTPQHKYRDS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02376 560 ProSiteProfiles C2 domain profile. 416 535 IPR000008 -
Bva06g02376 560 PANTHER SYNAPTOTAGMIN-4 1 559 - -
Bva06g02376 560 CDD C2 258 360 - -
Bva06g02376 560 Gene3D C2 domain 432 559 IPR035892 -
Bva06g02376 560 CDD C2 437 532 - -
Bva06g02376 560 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 254 385 IPR035892 -
Bva06g02376 560 Gene3D C2 domain 249 384 IPR035892 -
Bva06g02376 560 SMART C2_3c 257 357 IPR000008 -
Bva06g02376 560 SMART C2_3c 436 534 IPR000008 -
Bva06g02376 560 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 59 243 IPR031468 GO:0008289
Bva06g02376 560 Pfam C2 domain 256 360 IPR000008 -
Bva06g02376 560 Pfam C2 domain 435 536 IPR000008 -
Bva06g02376 560 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 559 IPR045050 GO:0008289
Bva06g02376 560 PRINTS C2 domain signature 452 464 IPR000008 -
Bva06g02376 560 PRINTS C2 domain signature 478 491 IPR000008 -
Bva06g02376 560 PRINTS C2 domain signature 500 508 IPR000008 -
Bva06g02376 560 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 65 242 IPR039010 -
Bva06g02376 560 ProSiteProfiles C2 domain profile. 237 358 IPR000008 -
Bva06g02376 560 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 431 554 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02376 Bva-Chr6 15314186 15318710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02376 258 523 Lipid Metabolism Gene Families AT5G06850 25.448 1.22e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02376 - - gmx:100787972 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02376 06 15314186 15318710 Bva06g02376 06 15314186 15318710 ECH