Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02371 ATGGGTACTCTTCTCAAGTGCTACAgacctttcttcttctcactTGTTCCTTACTCGGCTCGAACAACTCAGCTGAGAACCAATCACAGTGCTCACGCCGCCATTTTCAGGAGGAAGAAGCTATGTAGGTTTACTCGTTATTTTAGTGTCAGTTCTTTGGGGCCATCGCAGCCGTCGACTGCCCATCAGAACTGCGCAAAATCCGACGTTGAGAGCGTCAATAGTCCATCGCCGGAGCTGTGGCTGCACAACACGATGAGTAAAAGGAGGGAAATTTTCAAGCCGAAAGCAGAAGGAAAAGTGGGAATGTATGTATGCGGAGTTACTGCATATGATCTTAGTCATATTGGACATGCTCGCGTGTACATCAATTTTGATGTTCTTTACAGATACCTGAAGTACTTGGGATTTGAAGTTTGTTATGTTCGCAATTTCACTGACGTTGATGACAAGATAATTGCAAGAGCAAAGGAGTTAGGGGAGAATCCAATCAGTTTGAGCCAGCGATACTGTGAGGAGTTCAATCAAGATATGGCTACTCTAAATTGTCTGTCTCCTTCTGTGGAACCACGAGTCTCGGATCACATGCGGCAAATCATTGATATGATTGAGCAGATTCTTAACAATGAGTATGCCTACGTTGTTGATGGGGATGTATACTTCAATGTAGAAAAATTTCCTGAATACGGGAAATTATCTGGACGGGATCTAGAAGATAATCGAGCTGGTGAGAGGGTTGCTGTTGAttcaaggaagaaaaatcCTGCTGACTTTGCATTATGGAAGTCTGCAAAGTTGGGGGAGCCATTTTGGGAGAGTCCCTGGGGTCCTGGAAGACCTGGGTGGCATATTGAATGCAGTGCTATGAGTGCCGCTTATCTTGGTCATTCTTTTGACATCCATGGTGGGGGAATAGACCTTGTGTTTCCTcaccatgaaaatgaaattgctCAGAGTTGTGCTGCATGTGAGAAAAGTAATATTAGCTTCTGGATACACAATGGCTTTGTCACTGTTGACTCTGAGAAGATGTCTAAGTCTCTAGGAAACTTTTTCACAATTCGGCAGGTTGTAGACCTTTATCATCCACTGgctttgagatattttttgaTGGGAGCCCATTATCGATCTCCAATTAACTACACTTACATACAGCTTGAAAGTGCTTCAGACCGTGCTTACTATATATATGAGACACTACATGaatgtgaaaattttctgAGCCAGCATGATCCAACAATTAGGAAGGATCCCATTCTACCACCTGATACTTTGGATATCATTGATAAGTTCCATGATGTTTTTGTGGCCTCTATGTCTGATGATCTTCGCACTCCAGTTGTATTAGCTGCTTTGTCTGACCCATTAAAAGTAATCAATGAGCTGCTACATACTCGTAAGGGTAAAAAACAAGAATTGCGAATAGAATCACTTGCGGCTTTGGGAAAGAGTGTCAAGAATGTATTGATGGTTTTGGGACTTATGCCTGCAAGTTATTCTGAGGTTCTTCAGCAGCTGAGGGAAAAGGCCTTAAAGCGTGCGAATTTGACAGAAGAGGAGGTTTtacagaaaattgaagaacgGGCTGCTGCTAGAATAAACAAGGAATATGAAAAATCAGATGCAATTAGAAAGGATTTGGCTGTTTTAGGTATAACCCTTATGGATAGTCCCAGTGGTACAACTTGGAGGCCCATTGTGCCGTTCACACTTCAAGAGCAGCTAACTGCTACTCATTG 1739 0.4054 MGTLLKCYRPFFFSLVPYSARTTQLRTNHSAHAAIFRRKKLCRFTRYFSVSSLGPSQPSTAHQNCAKSDVESVNSPSPELWLHNTMSKRREIFKPKAEGKVGMYVCGVTAYDLSHIGHARVYINFDVLYRYLKYLGFEVCYVRNFTDVDDKIIARAKELGENPISLSQRYCEEFNQDMATLNCLSPSVEPRVSDHMRQIIDMIEQILNNEYAYVVDGDVYFNVEKFPEYGKLSGRDLEDNRAGERVAVDSRKKNPADFALWKSAKLGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGIDLVFPHHENEIAQSCAACEKSNISFWIHNGFVTVDSEKMSKSLGNFFTIRQVVDLYHPLALRYFLMGAHYRSPINYTYIQLESASDRAYYIYETLHECENFLSQHDPTIRKDPILPPDTLDIIDKFHDVFVASMSDDLRTPVVLAALSDPLKVINELLHTRKGKKQELRIESLAALGKSVKNVLMVLGLMPASYSEVLQQLREKALKRANLTEEEVLQKIEERAAARINKEYEKSDAIRKDLAVLGITLMDSPSGTTWRPIVPFTLQEQLTATH 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02371 579 Coils Coil 499 520 - -
Bva06g02371 579 Pfam tRNA synthetases class I (C) catalytic domain 93 389 IPR032678 -
Bva06g02371 579 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 421 565 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bva06g02371 579 CDD CysRS_core 81 382 IPR032678 -
Bva06g02371 579 PRINTS Cysteinyl-tRNA synthetase signature 139 148 IPR024909 -
Bva06g02371 579 PRINTS Cysteinyl-tRNA synthetase signature 103 114 IPR024909 -
Bva06g02371 579 PRINTS Cysteinyl-tRNA synthetase signature 299 320 IPR024909 -
Bva06g02371 579 PRINTS Cysteinyl-tRNA synthetase signature 268 286 IPR024909 -
Bva06g02371 579 PANTHER CYSTEINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 79 576 - -
Bva06g02371 579 PANTHER CYSTEINYL-TRNA SYNTHETASE 79 576 IPR024909 -
Bva06g02371 579 SUPERFAMILY Nucleotidylyl transferase 79 388 - -
Bva06g02371 579 Hamap Cysteine--tRNA ligase [cysS]. 80 566 IPR015803 GO:0004817|GO:0005524|GO:0006423
Bva06g02371 579 Gene3D HUPs 61 382 IPR014729 -
Bva06g02371 579 Gene3D - 383 565 - -
Bva06g02371 579 TIGRFAM cysS: cysteine--tRNA ligase 81 564 IPR015803 GO:0004817|GO:0005524|GO:0006423
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02371 Bva-Chr6 15292788 15297071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02371 K01883 - gmx:100786700 921.383