Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02340 ATGGCTCTCGGATTCTTTGTCCTCgcacttttccttttcctcggCCTCGATTCGGATAATGGCATCGGTTCCACGGCATCTGCTGCTACCGCTGATGGCGTCGAGGTGCAGATTACTTATGGGACAGTTCTGAAGCTTATGCATGAGAGGACCAAATTTCGTTTGCACTCTCATGAGGTGCCATATGGCTCTGGCAGTGGACAGCAATCAGTGACTGGTTTTCCCGGTGTTGATGATTCCAATAGTTACTGGATTGTTAGACCTGTGCCAGAAGCATCTGACAAACAAGGTGACACTATTAAAAGTGGAACAATCATTAGATTGCAACACATGAGAACAAGGAGATGGATGCACAGCCATTTGCATGCATCCCCAATATCTGGCAATCTTGAGGTGAGTTGCTTTGGAGGAGACTCCGAGTCTGACACCGGAGACTATTGGAGgCTATTAATAGAAGGAAGCGGGAAGACTTGGAAGCAAGATCAGAGGATTAGGCTTCAGCACGTGGACACTGGAGCCTATCTACATAGTCATGATAGAAAGTACAGCCGGATCGCTGGAGGACAGCAGGagGTTTGTGGCGTGCGTGAGAAACGTGCTGACAATGTTTGGTTGGCGGCTGAAGGCGTTTACCTCCCTGTTACTAACAGCAAATA 656 0.4649 MALGFFVLALFLFLGLDSDNGIGSTASAATADGVEVQITYGTVLKLMHERTKFRLHSHEVPYGSGSGQQSVTGFPGVDDSNSYWIVRPVPEASDKQGDTIKSGTIIRLQHMRTRRWMHSHLHASPISGNLEVSCFGGDSESDTGDYWRLLIEGSGKTWKQDQRIRLQHVDTGAYLHSHDRKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTNSK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02340 218 PANTHER BNAA09G55850D PROTEIN 1 216 - -
Bva06g02340 218 Pfam MIR domain 56 202 IPR016093 -
Bva06g02340 218 Gene3D - 22 218 - -
Bva06g02340 218 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 216 - -
Bva06g02340 218 ProSiteProfiles MIR domain profile. 35 89 IPR016093 -
Bva06g02340 218 ProSiteProfiles MIR domain profile. 97 152 IPR016093 -
Bva06g02340 218 SUPERFAMILY MIR domain 36 209 IPR036300 -
Bva06g02340 218 SMART mir_2 97 152 IPR016093 -
Bva06g02340 218 SMART mir_2 35 89 IPR016093 -
Bva06g02340 218 SMART mir_2 155 209 IPR016093 -
Bva06g02340 218 ProSiteProfiles MIR domain profile. 155 209 IPR016093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02340 Bva-Chr6 15127284 15130404 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02340 - - gsj:114414928 393.275