Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02305 ATGTGCGGAATCGAGACCAGTGCATTGGCCTTGCTGGCTTTTGGGCGTGTGAGCATAGCATCTACTTTTTCATCTAAGAGCACACAAGgaagggaaaaacaaaaggcaGAAACAGAGCTGGAAAAGGAAGCTTCCTACTACCATACTCGCTTACTTAACTCGctttccctttttcctttttgcttttttcctGCCCCTCTCCTCCACAACCAATCCCATCTTAAAACAAGGACACAACACAACACAAGCTCAGCTCTATCCTTTTACGGTCTAGCTATTCTTACTGTGTTCTCTACTCTGCTTGCCACTTCCCCAAACCACCACCAGCAGTTCTATCAGTTGCTTTCTACAGAATTCTGGTCAATGGAACGTAATAATCAGCATGGTCCAAGGACTGGTTTAAAGAGAAAGTCACCAGAAGATGGGGATCATCTACTAACCAACAGGTTTCCCCTGGATGACCTTAATGAAGACCTCTTTGAAAGGGTGCTTTCATGGCTACCAACTTCAACATTCTTTCGCCTCACTTCTCTGTGCAAAAGATGGAAATCTGTTGCTGCTTCTGCAAGTTTCAAGCTTGCCTGCTCTCAGATTCCTACACGAGATCCTTGGTTTCTGATGGTTGCTCCCAATCTCAACCAATCTTTCATATTTGACTCTGCAGAATGCAGTTGGAACAGGCTCAATCGTCCAAATCTTCTACTCGAGGATTCTAATCGAGGTTGTTTGCCAGTTGCAACCTCTGGTGGCTTGATTTGTTACCACAACTTAACTGGAAACTTCATTGTATGCAATCCTGTGACAGGTTCTTGTCGTGAACTCCCTCCACTGCATTTTGCTCCACACGATCAATCTCTCAATGCTATTGTGATGAGCACCTCTTCAAAATACCAACCCTCCTACAAAATTGTGTTAGTCTTCGGTGAACTTCCACATCTTTCCTTCAAGGTCTACGAATCAACCACTGGTTGCTGGGAAGATGAGACTGCACTGAAGAGAAAAGTTGATGATATTTCTATGGAATATGATTCGACTGATGACAATGTTGTATATTTCCTTAGCAAGGCCGGAAATGTAGTGACAAGCAATATGCAGCGAAGCCCAACTAAGCAATATTCTTCTGTAATTACTAACAAAGATGGGCAGCAGATGGTCTACTTTCTTAGCTCCTCAGGGACTGTAGTAGCTAGCAATTTGACAACCAAGTGCTTTTCCGAGTACCCCAGGCTTTTGCCTGTTTTTTGCGAATACTCCATTGACATTGTCGAATGTAATGATCGGATGCTAGTTGTTGTGCTCTCAGAGTTCCTGGAAAGTGCAAGTCTTAGGTTGTGGAGTTATGACGAGGTTAATCGATGCTGGCACCAGATTGCTGCAATGCCTCCAGCAATGTCTCATGAATGGTATGGCAAGAAAGCAGATATCAACTGTGTTGGGGCCGGTGACCAGATATTTATATGCTTGAATTCCTCCGAGCTATGTACTTATATTCTGTATGATTTGGTGACTAACAAATGGGTTGAATTACCAGAATGTCGCATTAACGGCAAAGTCATAGATTTTATGTCTGCCTTCTCGTTTGAACCTAGGATAGAGGCTTCTGTATG 1607 0.4225 MCGIETSALALLAFGRVSIASTFSSKSTQGREKQKAETELEKEASYYHTRLLNSLSLFPFCFFPAPLLHNQSHLKTRTQHNTSSALSFYGLAILTVFSTLLATSPNHHQQFYQLLSTEFWSMERNNQHGPRTGLKRKSPEDGDHLLTNRFPLDDLNEDLFERVLSWLPTSTFFRLTSLCKRWKSVAASASFKLACSQIPTRDPWFLMVAPNLNQSFIFDSAECSWNRLNRPNLLLEDSNRGCLPVATSGGLICYHNLTGNFIVCNPVTGSCRELPPLHFAPHDQSLNAIVMSTSSKYQPSYKIVLVFGELPHLSFKVYESTTGCWEDETALKRKVDDISMEYDSTDDNVVYFLSKAGNVVTSNMQRSPTKQYSSVITNKDGQQMVYFLSSSGTVVASNLTTKCFSEYPRLLPVFCEYSIDIVECNDRMLVVVLSEFLESASLRLWSYDEVNRCWHQIAAMPPAMSHEWYGKKADINCVGAGDQIFICLNSSELCTYILYDLVTNKWVELPECRINGKVIDFMSAFSFEPRIEASV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02305 535 PANTHER F-BOX/KELCH-REPEAT PROTEIN 147 535 - -
Bva06g02305 535 ProSiteProfiles F-box domain profile. 149 194 IPR001810 GO:0005515
Bva06g02305 535 SUPERFAMILY F-box domain 149 212 IPR036047 GO:0005515
Bva06g02305 535 Pfam F-box domain 152 187 IPR001810 GO:0005515
Bva06g02305 535 Gene3D - 205 519 IPR015915 GO:0005515
Bva06g02305 535 SUPERFAMILY Kelch motif 211 512 IPR015915 GO:0005515
Bva06g02305 535 Gene3D - 147 192 - -
Bva06g02305 535 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 147 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02305 Bva-Chr6 14944685 14947573 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02305 - - gmx:100786481 652.514