Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02297 ATGGCTGTTGAGTTGAAATGGTGCGTGGTAACCGGAGGGCGGGGCTTTGCCGCTCGCCATTTGGTCGAAATGCTTATCCGACACAACATGTACTCCGTTCGGATCGCCGATTTGGGACCCACTATTCAACTTGAACCGCCTGAGAAAAATGGGATTCTCGGCGAAGCTTTACGCTCTGGTCGTGCCGAATATATATCTACTGATCTTCGTAACAAGTCTCAAGTACTTGAAGCATGCGAAGGAGCTGAGGTTGTCTTCCATATGGCGGCTCCAAACTCTTCCATTAACAGTTACCAGCTTCATCATTCTGTGAATGTTGAAGgAACGAAGAATGTAATTGATGCTTGTATTGAGCAAAAAGTGAAGCGACTTATTTATACGAGCTCTCCTAGCGTGGTCTTTGACGGGGTTCATGGAATTTTTAATGGAGATGAATCATTACCGTACCCACCTAAGCATAATGATCATTATTCGGCAACTAAAGCTGAGGGTGAGGCATTGGTTCTCAAGTCTAATGGAAGTAATGGGCTCCTGACTTGCTGTATACGCCCTAGCAGCATTTTTGGCCCTGGTGATAAGCTGCTGGTACCTTCATTGGCTGCCGCCGCCAGGGCTGGGAAATCTAAGTTCATTATTGGCGATGGCAATAATCTTTATGATTTTACTTATGTTCAAAATGTGGCTCATGCCCACTTGTGTGCTGAACGAGCGCTAGCTTCAGAAGGGGCAATTGCAGAAAAAGCTTCAGGGGAGGCATATTTCATAACAAATATGGAACCTATAAAGTTTTGGGAGTTTGTATCACTTATTCTGGAAGGTCTTGGATATGAAAGGCCAAGAATAAAGATCCCTGCCTCTGTTATGATGCCTATTGCACATATGGTGGAGTGGACATATAAGCTGCTAGGCCCATATGGGATGAAGGTGCCACAGTTGACACCCTCGAGAATAAGACTCCTATCTTTGAGCAGGACGTTTGATTCTTCAAAAGCAAAGGATCGCCTTGGCTACACGCCAATCATATCGCTTCAGGAGGGTCTGCAGAAGACAATTGAATCATACCCAGACTTGAGGGCTGAAAATGCACTTAAAACTAAACGGGAAGGGCCATCAAAAGCTTCCATACATCTTGGAGGTGGAAAAGTTGCTGACACATTGCTCTGGAAGGATAAAAAGCAAACTGTGACGACATTGCTAGTTTTGGTTGCAATATACTATAACTTCATTGCATCTGGGTGTACAATCCTCACTGCTCTTTCGAAGCTTCTATTgttttcattcatatttttattcattcatgGAATTCTCCCTGAAAAAATATTAGGATATACGGTTGAGAAAATGCCTACATCGTGGTTTCATTTATCTGAAGATATGTCACATCAAGTTGTTCAATCCGTGGCTTCATTATGGAATTATTCCGTCAATATTTTGAAGTCCATTGCAAAAGGGAATGATTGGCTACTGTTCCTTAAGGTTGTTATCTCTCTGCTTATTCTGAGCTTCTTTGGAGCCTTTTCATTTCAGAACTTATATATTACAGGATTTACCTTTGCATTTATAGCTTTCTACCTGTACGAGAAGAAGGAGGAAGACATTGATGCCATTCTGCTAAGAACACGTTCTTATGGGTGCAAATTAAAATCTGATCTTGTCGGGAAGTTCGTTCCTTCAAAAAGGATCCATTA 1688 0.42 MAVELKWCVVTGGRGFAARHLVEMLIRHNMYSVRIADLGPTIQLEPPEKNGILGEALRSGRAEYISTDLRNKSQVLEACEGAEVVFHMAAPNSSINSYQLHHSVNVEGTKNVIDACIEQKVKRLIYTSSPSVVFDGVHGIFNGDESLPYPPKHNDHYSATKAEGEALVLKSNGSNGLLTCCIRPSSIFGPGDKLLVPSLAAAARAGKSKFIIGDGNNLYDFTYVQNVAHAHLCAERALASEGAIAEKASGEAYFITNMEPIKFWEFVSLILEGLGYERPRIKIPASVMMPIAHMVEWTYKLLGPYGMKVPQLTPSRIRLLSLSRTFDSSKAKDRLGYTPIISLQEGLQKTIESYPDLRAENALKTKREGPSKASIHLGGGKVADTLLWKDKKQTVTTLLVLVAIYYNFIASGCTILTALSKLLLFSFIFLFIHGILPEKILGYTVEKMPTSWFHLSEDMSHQVVQSVASLWNYSVNILKSIAKGNDWLLFLKVVISLLILSFFGAFSFQNLYITGFTFAFIAFYLYEKKEEDIDAILLRTRSYGCKLKSDLVGKFVPSKRIH 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02297 562 ProSiteProfiles Reticulon domain profile. 382 562 IPR003388 -
Bva06g02297 562 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 364 - -
Bva06g02297 562 Gene3D - 2 358 - -
Bva06g02297 562 Pfam Reticulon 382 537 IPR003388 -
Bva06g02297 562 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 357 IPR036291 -
Bva06g02297 562 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 283 IPR002225 GO:0003854|GO:0006694|GO:0016616
Bva06g02297 562 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 2 6 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02297 Bva-Chr6 14906501 14912218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02297 2 371 Lipid Metabolism Gene Families AT2G33630 32.216 7.57e-49 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02297 K23558 - vvi:100257631 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02297 06 14906501 14912218 Bva06g02297 06 14906501 14912218 ECH