Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02293 ATGAGCTCATCCAAGAAAGGATCCCAAATGGACGGAAAGCTAAGCTCCCCAAAAAAGACAATCACAACATTGAATCCAAATGCGGCAGAGTTCATTCCTCTTTCCCTTAGATCACCATCAAGTGGAAGTACCAGTATAACAGATGCAACAACAAGGTTCGCAACTGCTGGAGCTCTTGGGAAAGCAATTTTAGATCGATCAGAGTCATCCATTTCAAATAATTCTGATGATGAGGCCCACCGATACTGGCGTTGTCAGCTCCCCGATGATATCACCCCTGACTTCAAGGTCATGGGAGAAGATGAGTCCCAAGGTCTTAGCAACCTCTCTTTAGCGGGCCTGTCCTTACATGAAGACTATGAAGCGTCAAGATTTCCTTCTTCTAAAGGAAGCAGATATATGTTAAATGAGCAGCAGGACTTATCTCAACAGTACCTTAATGGAAATAGCTTTGCTGATAAATCAAGGTTTTCCAGTTCAACCTACAGGGAGGACCCATCTTCAACAAGCTTTCTTCACATGTTGACGAAACCTTGGGATAGGCAAATTGGGAATGGCAACCATCTTGTTGGTAGTGGTCAAGATGGGCTTGCTTATGATGACAACTCTAGACATGGGTTCTTCAATGACGTGTTGGGTGAGCAAACCATTGTAGATGATGCTGATATGAACCCTCTGGAGTTTTTGGCTTCCCAATTCCCTGGTTTTGCCGCTGAAAGCCTGGCGGAAGTTTACTTTGCCAATGGATGTGATCTAAATTTGACCATTGAGATGCTCACTCAGTTAGAGCTTCAAGTTGATGGTAGTTTTAATCAGAATCTGAATTCAAAGACTCTGTCAGCTCCCAATCTCAGCGCAATGGACTTTCCTGTACTGACTGCACCTGATGGCCAGACTACTTCAGTTAAATATGCTGGAGATGATGTCCAACAAAGTGGCAATCCCTACCGATCATCTGACAAGGAAAACATGTTATTTTTCAAGACAAACTCTACAATTCCATCTAGAGGTGCTACTGACTTTGCATCAGCTGTCAGGAAATTGGCTTCCCAAGATTCTACTATATGGAAGTATGATAGGAATGGTTCTGGTGATGCTGCCATTGGCTCTAGTAGAACTTCTAATGTTCTTATTAATAATGGCGGACAGGGGAGAGCCAACCTTGGCGATAGATTGCAGAACCGTGGTTCAGCTCGGGCTGCTCCTGTTTGGCTTGAAACTGGTGACGCAGTTGCTAATATGTATTCTGAGTTGCGAGAGGAGGCTCGTGATCATGCACGCATACGCAATGCATATTTTGAGCAGGCACGACAAGCATACCTCATAGGGAATAAGGCCCTAGCAAAGGAACTTAGTGTTAAAGGGCAACTACACAACATGCATATGAAAGCAGCTCATGGAAAAGCACAGGAAGCTATTTATCGCCAGAGGAATCCAGTTGCTGCTGAGATGCAGGGCAACGGAAGAGGACACGAGAGGACGATAGATCTACATGGGCTGCATGTAAATGAGGCCATTCATGTACTGAAACATGAACTGAGTGTCCTGAGAAGCACTGCGAGAGCAGCTGAGCAGCGTTTGCAGGTTTATATATGTGTTGGTACAGGCCACCACACGAGGGGCTCCCGCACTCCTGCAAGACTTCCGATAGCTGTACAGCGATACCTACTTGAAGAAGAGGGTCTTGACTACACAGAACCGCAGCCGGGCCTTCTTCGTGTTGTGATATATTG 1733 0.4541 MSSSKKGSQMDGKLSSPKKTITTLNPNAAEFIPLSLRSPSSGSTSITDATTRFATAGALGKAILDRSESSISNNSDDEAHRYWRCQLPDDITPDFKVMGEDESQGLSNLSLAGLSLHEDYEASRFPSSKGSRYMLNEQQDLSQQYLNGNSFADKSRFSSSTYREDPSSTSFLHMLTKPWDRQIGNGNHLVGSGQDGLAYDDNSRHGFFNDVLGEQTIVDDADMNPLEFLASQFPGFAAESLAEVYFANGCDLNLTIEMLTQLELQVDGSFNQNLNSKTLSAPNLSAMDFPVLTAPDGQTTSVKYAGDDVQQSGNPYRSSDKENMLFFKTNSTIPSRGATDFASAVRKLASQDSTIWKYDRNGSGDAAIGSSRTSNVLINNGGQGRANLGDRLQNRGSARAAPVWLETGDAVANMYSELREEARDHARIRNAYFEQARQAYLIGNKALAKELSVKGQLHNMHMKAAHGKAQEAIYRQRNPVAAEMQGNGRGHERTIDLHGLHVNEAIHVLKHELSVLRSTARAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRYLLEEEGLDYTEPQPGLLRVVIY 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02293 577 SMART SMR_2 492 577 IPR002625 -
Bva06g02293 577 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 577 - -
Bva06g02293 577 MobiDBLite consensus disorder prediction 1 25 - -
Bva06g02293 577 ProSiteProfiles Smr domain profile. 495 577 IPR002625 -
Bva06g02293 577 CDD CUE_CID7_like 224 265 IPR041806 -
Bva06g02293 577 SMART DUF1771_2 414 479 IPR013899 -
Bva06g02293 577 Coils Coil 506 526 - -
Bva06g02293 577 Pfam Smr domain 495 563 IPR002625 -
Bva06g02293 577 Gene3D - 462 576 IPR036063 -
Bva06g02293 577 Pfam Domain of unknown function (DUF1771) 415 478 IPR013899 -
Bva06g02293 577 SUPERFAMILY SMR domain-like 493 575 IPR036063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02293 Bva-Chr6 14877003 14881283 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02293 - - gmx:100796128 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02293 06 14877003 14881283 Bva06g02293 06 14877003 14881283 ECH