Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02285 ATGGGTATTGAAAGAGTATCTTGGGCCATTTTTCTGATATGGCTCTCTACGTTTCAAGGATACTTGCTGCTTGTGAATGGTGGATTCAATTACAAGGAAGCTCTCACCAAGTCCCTTATCTTCCTAGAGGCACAACGATCAGGAAAACTCCCTAGCAACAACAGGGTGCCCTGGAGAGGAGACTCAGGACTGGATGATGGAAAACTTGCCAACGTGGACCTTGTTGGTGGATACTATGATGCAGGGGACAATGTCAAGTATGGGCTTCCCATGGCCTTCACAGTCACTACCCTATCATGGGCTGCCATATTTTACGAGAAAGAATTGAAAGACACCAAAGAATTGGAGCATGTTCAAGATGCTATTAAATGGGGTActgattattttctaaaagctTGTTCTCGACGTAAACGATTATATGTTCAGGTCGGAGATCCAGTAGAGGATCACGAATGTTGGATTCGACCAGAAAATATGAACACAACAAGAACTGTTTTGAAGATTGACAGTAAAACACCGGGGTCAGAGATAGCTGCTGAAACTTCAGCAGCAATGTCTTCTTCGGCAATTGTATTTAGACGCATAGATGGTGCTTATTCACGTCGTCTCCTCAACAAAGCCAAACTGCTCTTCCATATGGCAAAATCGTCTAAAGGAACTTATGATGGAGAATGTCCCTTCTATTGCTCCTTCTCTGGTTAcaatGACGAGATGATGTGGGCAGCAGCATGGCTATACTTAGCTACCCAAAAGTCAATGTACCTGAAGTATTTAACAGAAGAAACCATTAGTGCTAGAATAACTGAGTTTAGTTGGGACCTTAAATATGCCGGAGCTCAAGTCCTTCTCTCTCAGTTGCATTTCCAAGGAAGGGACAAACTGGAAACATTCAAAAACCATGCTGATAGTTTTATGTGTTCTGTACTTCCCGATAGTCCCTATCGCCAGATTAGCTTGTCTCCCGGTGGGTTTGTTCATTTGAGAGATGGAGCCAACACGCAATATGCTACTGGTACTGCTTTCTTGTTTAGCGTTTATAGTGATTTGCTTAGCCAACACAAGCAGAAACTCACATGTGGAGATAAAGAATTCAGCCCAAAACACCTCTTCGATTTCGCTAAAAGCCAAattgattatatattaGGGAAAAACCCTGAAAATAGATCGTACATGGTTGGATTTGGGAAGAACCCGCCAAAGCAACCTCATCACAGAGGCGCTTCGGTGCCAACGTTGAAGAAAGGCGAAGCAGTGAACTGTGGCATGAGCTTCGTGTACTGGTGTAACAAAGAAGAGGCAAACCCACACGAGCTAACCGGTGCCATAGTGGGCGGACCCGACCGCAACGACAAATTCGTCGATAAACGTACGGCTTCAAGCTACACTGAACCTTGCACATACATTAACTCCCTCGCAGTTGGTCCTCTGGCAAAGCTTGCTTCTTTGCACAATTA 1454 0.4354 MGIERVSWAIFLIWLSTFQGYLLLVNGGFNYKEALTKSLIFLEAQRSGKLPSNNRVPWRGDSGLDDGKLANVDLVGGYYDAGDNVKYGLPMAFTVTTLSWAAIFYEKELKDTKELEHVQDAIKWGTDYFLKACSRRKRLYVQVGDPVEDHECWIRPENMNTTRTVLKIDSKTPGSEIAAETSAAMSSSAIVFRRIDGAYSRRLLNKAKLLFHMAKSSKGTYDGECPFYCSFSGYNDEMMWAAAWLYLATQKSMYLKYLTEETISARITEFSWDLKYAGAQVLLSQLHFQGRDKLETFKNHADSFMCSVLPDSPYRQISLSPGGFVHLRDGANTQYATGTAFLFSVYSDLLSQHKQKLTCGDKEFSPKHLFDFAKSQIDYILGKNPENRSYMVGFGKNPPKQPHHRGASVPTLKKGEAVNCGMSFVYWCNKEEANPHELTGAIVGGPDRNDKFVDKRTASSYTEPCTYINSLAVGPLAKLASLHN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02285 484 Pfam Glycosyl hydrolase family 9 31 474 IPR001701 GO:0004553|GO:0005975
Bva06g02285 484 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 379 405 IPR018221 -
Bva06g02285 484 Gene3D - 26 484 IPR012341 GO:0005975
Bva06g02285 484 PANTHER ENDO-1,4-BETA-GLUCANASE 10 480 - -
Bva06g02285 484 PANTHER ENDOGLUCANASE 16-RELATED 10 480 - -
Bva06g02285 484 SUPERFAMILY Six-hairpin glycosidases 28 482 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02285 Bva-Chr6 14845518 14847916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02285 22 481 Glycoside Hydrolase AT3G43860 68.547 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02285 K01179 - gmx:100811509 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02285 06 14845518 14847916 Bva06g02285 06 14845518 14847916 ECH