Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02277 ATGATGATAGCCTACCTTGAGCACTTTGTGCACGGAAATGACACAGAATCGAGGCCGGACGACGACGTCACCGAAGTGCTTGACCTCCAACTTAAAGGCACTTTTGACTGCGTTCACACCGGAATAGCCAGTAAGGATTTCGGCGGCATCAAATCTGTGAAACCACTGGCCATCATTAGACCCGCCGATGCCGACGACGTTGCTCGAGTTGTCAAAGCGGCCGTCACTTCGTCCAATCTGACTGTAGCGGCGCGAGGCAACGGTCACTCGATTAACGGCCAGGCTATGGCCGATCGAGGTCTCGTCCTAAATATGCGAACCATGGAGGACTACTTTCAGGTGATGCCGATAAATGACTCGCCTTACGTTGACGTCTCGGGAGGGGCATTATGGGAAGACGTTCTTAGACGGTGCGTGCTGGAGTATGGTTTAGCCCCGAGGTCATGGACAGATTATCTGAGTTTAACGGTGGGCGGAACGTTGTCCAACGCTGGTGTGAGCGGCCAAGCCTTCCGTTACGGTCCACAAACGTCCAACGTAACAGAATTGGAGGTTGTAACTGGCAAAGGCGATACCGTTATTTGCTCCGAAAACCAAAATTCGGAGCTTTTCTTCGGGGTTCTGGGTGGTCTCGGTCAGTTCGGCATCATTACCAGAGCTCGAGTTGTGCTGCAACAAGCTCCAGACATGGTGAGGTGGATTAGAGTTGTTTATTCGAAGTTCGAAGATTTTACTGAAGATGCTGAAGCTTTAGTGAGCCTCCAAGAGAGGGGTTTTAACTACGTAGAAGGATTTGTGTTCGTCAACAGTGACGACCCCGCCAATGGATGGCCCACCGTTCCATTCCCTGACCAAGAATTCGACCCGACTCGCATCCCTCATACCGCTGGCCCCGTCCTCTACTGCCTGGAACTAGCTCTTCACTATCGAAACACAGACCACGTTTCAGATGTAAATATGGATGTGGATAGATTGCTTGGAGGGCTACGATTTATTGAGGCTTTCAAGTTCGAGGCGGACGTGGAATACGCGGAGTTCTTGCTACGTGTGAAGCGTGCGGAGGAAGACGCCAAGGCCAACGGCAACTGGGACGCACCTCACCCTTGGCTGAACCTCTTGGTGGCCAAGTCCAATATCCTTGAATTTGATCGTGTGGTGTTCAAGAAGATCCTCAAGGACGGGGTCGGCGGGCCCATTCTGGTCTACCCTCTCTTGCGATCAAAGTACACAAGGATGGCACTTTCTAGGAATTGGAATTTTGCTTCCTCGAGGGACCAAGGAATTCCGCTGTGGGATAGTCGTACATCTGTGGCGGTGCCCGAAAGTGAGATCTTCTACATAGTAGCGCTTCTCCGTTTTACCCCTCCAGCCCCGCAAGGGCCGGCCGCCGAATTATTGGTGGCGCAAAACCAAGAGATCATCCAGTTCTGTTCCAGCAGAGGCTTTGATTTCAAGCTATACCTTCCTCACTACCAGTCAAGGGAAGATTGGAAACGACACTTTGGGGATCAATGGACCAGATTCGCAGAGAGAAAAGCCAATTTTGATCCCCTGGCAATCCTTGCACCTGGACAGAAAATTTTCCCCAGAATCCATCAATCCTA 1604 0.5143 MMIAYLEHFVHGNDTESRPDDDVTEVLDLQLKGTFDCVHTGIASKDFGGIKSVKPLAIIRPADADDVARVVKAAVTSSNLTVAARGNGHSINGQAMADRGLVLNMRTMEDYFQVMPINDSPYVDVSGGALWEDVLRRCVLEYGLAPRSWTDYLSLTVGGTLSNAGVSGQAFRYGPQTSNVTELEVVTGKGDTVICSENQNSELFFGVLGGLGQFGIITRARVVLQQAPDMVRWIRVVYSKFEDFTEDAEALVSLQERGFNYVEGFVFVNSDDPANGWPTVPFPDQEFDPTRIPHTAGPVLYCLELALHYRNTDHVSDVNMDVDRLLGGLRFIEAFKFEADVEYAEFLLRVKRAEEDAKANGNWDAPHPWLNLLVAKSNILEFDRVVFKKILKDGVGGPILVYPLLRSKWDSRTSVAVPESEIFYIVALLRFTPPAPQGPAAELLVAQNQEIIQFCSSRGFDFKLYLPHYQSREDWKRHFGDQWTRFAERKANFDPLAILAPGQKIFPRIHQS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02277 512 Gene3D - 43 506 IPR016167 -
Bva06g02277 512 Pfam FAD binding domain 55 196 IPR006094 GO:0050660
Bva06g02277 512 Gene3D - 105 229 IPR016169 -
Bva06g02277 512 SUPERFAMILY FAD-linked oxidases, C-terminal domain 228 506 IPR016164 GO:0003824|GO:0050660
Bva06g02277 512 ProSiteProfiles PCMH-type FAD-binding domain profile. 51 227 IPR016166 GO:0071949
Bva06g02277 512 SUPERFAMILY FAD-binding/transporter-associated domain-like 35 224 IPR036318 GO:0050660
Bva06g02277 512 PANTHER GULONOLACTONE OXIDASE 10 511 - -
Bva06g02277 512 Gene3D - 231 465 IPR016170 -
Bva06g02277 512 PANTHER CYTOKININ DEHYDROGENASE 7 10 511 - -
Bva06g02277 512 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 228 506 IPR015345 GO:0009690|GO:0019139|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02277 Bva-Chr6 14798364 14802342 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02277 K00279 - gmx:100795849 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02277 06 14798364 14802342 Bva06g02277 06 14798364 14802342 ECH