Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02271 ATGGGTGAGGCTCCGCAGGTGATCTATGACGTCAATGGCCAAGAAACTGATGATCAGAATCAGGATTCTTGGTTCGAAGAAGTGATCGACCATGATCTCAAATGGTCTTTTTCATTGAATAGCGTCCTACATAAAGGGATTAGCGAGTACCAGGAGATAGCTCTGTTAGACACACAGCGTTTTGGCAAGGCGTTGGTGATTGATGGGAAGATGCAGAGTGCTGAATTGGATGAATTCATATATCACGAATGTTTGATTCATCCACCTCTATTATCTCATCCCAACCCCAAAACGGTGTTTATAATGGGAGGCGGCGAAGGTTCTGCTGCTAGGGAAGCACTCAAGCACAAGTCAATAGAGAGAGTAATTATGTGCGACATAGACCAGGAGGTGGTAGATTTCTGCCGCCAATACTTGACTGTAAATAGAGAAGCCTTTTCTCATAAGAAGCTCCACCTCGTCATCAATTGTGCCAAGGCTGaattagagaagagaaaggacaAGTTTGATATCATAATTGGGGATTTGGCAGACCCAGTTGAAGGAGGACCTTGCTATCAACTCTACACCAAATCCTTCTATGAGAAAACCCTCAAGCCCAAGCTCAATGACAATGGTATTTTTGTGACCCAgGCTGGACCCGCAGGAATCTTCACACACAAGGAAGTCTTCACTTGCATATATAACACAATTAAACAGGTCTTCAAATATGCGATGGTATACACAACACATATACCATCTTTTGCTGACACCTGGGGATGGGTTATGGCCTCCGACCAACCATTCTCAATTGGTGCCGAGAAAATGGACAAAAGAATCCAAGCAAGAATAGATGGGGAATTGCTCTATCTAAATGGGGACTGGTTCCAATCATCTACCATCATGAATAAGACCGTTTCACAATCGCTGCAGAATGAAACTCATGTTTACACCGAAGAAGATGCAAGATTCATCCATGGCCATGGCGTGGCTAAGCGAATCTA 983 0.4303 MGEAPQVIYDVNGQETDDQNQDSWFEEVIDHDLKWSFSLNSVLHKGISEYQEIALLDTQRFGKALVIDGKMQSAELDEFIYHECLIHPPLLSHPNPKTVFIMGGGEGSAAREALKHKSIERVIMCDIDQEVVDFCRQYLTVNREAFSHKKLHLVINCAKAELEKRKDKFDIIIGDLADPVEGGPCYQLYTKSFYEKTLKPKLNDNGIFVTQAGPAGIFTHKEVFTCIYNTIKQVFKYAMVYTTHIPSFADTWGWVMASDQPFSIGAEKMDKRIQARIDGELLYLNGDWFQSSTIMNKTVSQSLQNETHVYTEEDARFIHGHGVAKRI 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02271 327 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 22 259 IPR030374 -
Bva06g02271 327 Pfam Spermine/spermidine synthase domain 78 255 - -
Bva06g02271 327 Pfam Spermidine synthase tetramerisation domain 24 75 IPR035246 -
Bva06g02271 327 PANTHER BNAA02G04280D PROTEIN 18 326 - -
Bva06g02271 327 Gene3D Spermidine synthase, tetramerisation domain 22 74 IPR037163 -
Bva06g02271 327 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 303 IPR029063 -
Bva06g02271 327 Hamap Polyamine aminopropyltransferase [speE]. 23 304 IPR001045 GO:0003824
Bva06g02271 327 Gene3D Vaccinia Virus protein VP39 75 327 IPR029063 -
Bva06g02271 327 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 18 326 - -
Bva06g02271 327 CDD AdoMet_MTases 103 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02271 Bva-Chr6 14767901 14770948 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02271 K18787 - gmx:100784972 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02271 06 14767901 14770948 Bva06g02271 06 14767901 14770948 ECH