Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02261 atGGATTTCAGGCTGATGGGTCTCGATTCGCCATTTCTCCACACTCTACATCATGTTATGGACGCGACAGACGATAATGCGGATAAGTCCTTCAACGCTCCGACACAGACATATGTTCGTGATGCGAAGGCTATGGCAGCGACTCCAGCAGACGTGAAGGAGTATCCCAATTCGTACGTGTTCATCATCGACATGCCTGGGTTGAAATCTGGGGATATCAAGGTTCAGGTGGACGACAATGTGCTCATGATCAGCGGCGAGAGGAAGAGAGacgaagagaaagaaggagcCAAATATTTGAGAATGGAAAGAAGGGTGGGCAAATTTATGCGCAAGTTTGTGCTCCCAGAGAATGCCAACATGGATGCCATTGCTGCAGTTTGCCAGGACGGTGTGCTTACGGTCACTGTCCAGAAACTGCCTCCGCCGGAGCCCAAGAAACCCAAGACCATTCAGGTTCAGATTGCTTA 470 0.4787 MDFRLMGLDSPFLHTLHHVMDATDDNADKSFNAPTQTYVRDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDDNVLMISGERKRDEEKEGAKYLRMERRVGKFMRKFVLPENANMDAIAAVCQDGVLTVTVQKLPPPEPKKPKTIQVQIA 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02261 156 SUPERFAMILY HSP20-like chaperones 20 148 IPR008978 -
Bva06g02261 156 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 41 154 IPR002068 -
Bva06g02261 156 Pfam Hsp20/alpha crystallin family 51 154 IPR002068 -
Bva06g02261 156 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 9 155 - -
Bva06g02261 156 Gene3D - 8 155 IPR008978 -
Bva06g02261 156 PANTHER 18.0 KDA CLASS II HEAT SHOCK PROTEIN 9 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02261 Bva-Chr6 14737153 14737951 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02261 K13993 - pop:7462237 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02261 06 14737153 14737951 Bva06g02261 06 14737153 14737951 ECH