Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02257 ATGGAATGGTGGACTCATTTATGGCTCAACGAGGGGTTTGCAACATGGGTCAGCTATTTAGCAGCAGATAGCTTGTTTCCCGAGTGGAAAATATGGTCTCAATTTCTTAATGAATCTACTGAGGGTCTTAAGTTGGATGGGCTTGCAGAATCCCACCCAATTGAGACAGAAATAAATCACGCTCGTGAGAttcatgaaatatttgatgcaGTAAGTTATAAAAAAGGTGCGTCTGTAATCAGGATGCTACAAAGCTATCTAGGTGCTGAATGTTTTCAGAGATCACTTGCttcatacataaaaaaatttgcatgctCAAATGCTAAAACTGAGGATCTATGGGCTGTCCTTGAGGAAGGATCTGGTGAACCTGTGAACAAGTTAATGAACTCTTGGACAAAGCAGAAGGGATATCCCGTTGTCTCTGTCAAAGTCAATAATCAGAAATTGGAGTTTCAGCAGTCACAATTCCTGTCAAATGGAGCTCATGGAGAAGGCCATTGGATTGTTCCTATTACACTATGTTCTGGCTCATATGGTGTCCACAAGAATTTCCTCCTGCAAACAAAAACTGAAACTTTGGATCTTGAAGAACTCTTCGCTGAAGATAAAGGAGCAAATTCGTGGATAAAACTTAACGCGGATCAGACTGGTTTCTATAGAGTGAAATACGATGAGCGGCTTGCAGCTAGGCTTAGATATGCTGTAGAGAAACAATACTTATCTCCAACTGACCGATATGgCATTTTGGATGATTTATATGCACTTTGTATGGCTCGTCAGGAATCATTGACCTCCTTGCTTACCTTAATGGAAGCCTACAGGGAGGAAATTGACTATACTGTGCTGTCTAACCTAATTACTATAAGTTATAAAGTTGGAAGAATTGCTGCTGATGCTGTCCCAGAGTTACTAGACTATATTAAGCAATCCTTTGTCAACCTTTTTCAGTACTCTGCTGAGAGGCTTGGATGGGAGGCTAAACCAGGTGAAAGCCATCTTGATGCAATGCTGAGGGGAGAAGTTTTGACTGCCCTTGCTGTGTTTGGACATGATCTGACACTTGATGAAGCAAGTAGGCGTTTTCAGGCATTCTTAGAAAACAGAAATACACCGCTCCTTCCCCCAGACATAAGAAAGGCAACATATGTAGCAGTAATGCAGAGGGCAAGCAAATCTAACCGATTTCGTTATGAATCCCTTCTGAAAGTTTACAGAGAATCTGATCTAAGTCTGGAGAAAACACGCATTCTAAGTAAATTGGCATCTTCACCTGATTCAGATCTAGTTTTTGAAGTCCTGAACTTCATGTTGTCTTCTGAgGTTCGTAGTCAGGATGCTATTTTTGGACTTGCTGTTAGTCCGGAAGGACGTGAAATAGCTTGGAAATGGCTAAAGGAGAATTGGGAACACATCTCAAAAACATATGGTTCTGGATTATTGCTAACTTACTTTGTCAGTGCAACTGTCTCACCGTTTGCATCGTTTGAGAAGGCTAAGGAAGTAGAGGAGTTCTTTGCTACCCGTTCTACCACTGCAATTGCTAGAACGTTGAAACAGAGCCTTGAGCGGGTTCATATAAATACAAACTGGGTTCAGAGTGTTAAGAATGAGaaaactcttcccgaggctgCCATTGAGTTGGCATACCGCAAGTACTA 1661 0.4004 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWSQFLNESTEGLKLDGLAESHPIETEINHAREIHEIFDAVSYKKGASVIRMLQSYLGAECFQRSLASYIKKFACSNAKTEDLWAVLEEGSGEPVNKLMNSWTKQKGYPVVSVKVNNQKLEFQQSQFLSNGAHGEGHWIVPITLCSGSYGVHKNFLLQTKTETLDLEELFAEDKGANSWIKLNADQTGFYRVKYDERLAARLRYAVEKQYLSPTDRYGILDDLYALCMARQESLTSLLTLMEAYREEIDYTVLSNLITISYKVGRIAADAVPELLDYIKQSFVNLFQYSAERLGWEAKPGESHLDAMLRGEVLTALAVFGHDLTLDEASRRFQAFLENRNTPLLPPDIRKATYVAVMQRASKSNRFRYESLLKVYRESDLSLEKTRILSKLASSPDSDLVFEVLNFMLSSEVRSQDAIFGLAVSPEGREIAWKWLKENWEHISKTYGSGLLLTYFVSATVSPFASFEKAKEVEEFFATRSTTAIARTLKQSLERVHINTNWVQSVKNEKTLPEAAIELAYRKY 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02257 553 Gene3D Neutral Protease Domain 2 1 137 IPR027268 -
Bva06g02257 553 PANTHER AMINOPEPTIDASE 1 549 - -
Bva06g02257 553 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 1 143 - -
Bva06g02257 553 Pfam ERAP1-like C-terminal domain 209 526 IPR024571 -
Bva06g02257 553 Gene3D - 138 224 - -
Bva06g02257 553 Pfam Peptidase family M1 domain 1 132 IPR014782 GO:0008237|GO:0008270
Bva06g02257 553 Gene3D - 226 540 - -
Bva06g02257 553 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 1 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02257 Bva-Chr6 14724160 14727998 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02257 K08776 - gmx:100811437 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02257 06 14724160 14727998 Bva06g02257 06 14724160 14727998 ECH