Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02238 ATGGACCCGTCCAGCCAATCGTTCTGGGTTTTGAAGCAATTCTATGGCGCTCGCTCGATCAATCCCTACCACGCCTTGTCCTCATATATGAGTCATGTATATCACATCCAAAATCACTACGCACACTCCATACAAAAGGAAAGAGCCACTGGACTCTCCTTCAACAATCGTACTTCCGCAACTCCCTTTTGCCACTGGAAAGGGGCGTTACAATGGGAGAGCTCAGAAAGTACATTTCACAGCAAGAACTTAGCAGACATAACAAACGAGGAGATCTGTGGATCTGTATTCAGGGAAAGATCTACAAATGTCTCGGATTGGGCTAATGACCACCCCGGCGGTGAGCTTCCATTGTTCAGTCTTGCTGGCCAGGACGTCGCCGACGCTTTCGTCGCTTACCATCCGGGCACTGCATGGCAGTACCTCGACAAATTCTTCACTGGGTATTATCTACAGGACTACTCTGTCTCAGAGGTATCTAAAGATTACCGAAAGCTTCTTTCCGAGTTTTCCAAAATGgatttatttgaaaagaaaggaCATGGTGTGTTCTTTGCACTATGCTTTATGGcacttttgttttcattgagTGTTTGTGGTGTTTTGTGCTCAAGTAGCCCATGGGTGCATGTGGCTTCTGGTGGGTTAATGGGGTTCTTGTGGATTCAGAGTGGGTGGATTGGGCATGACTCTGGGCATTACCAGGTTATGGCAACCCGAGGATTCAATCGCTTCGCTCAGCTCCTTGCTGGGAATTGCCTCGCGGGAATCAGTATTGGGTGGTGGAAGTGGAATCACAATGCCCATCACATTGCTTGTAATAGTCTTGATTTCGATCCAGATCTTCAGCATTTGCCCTTTTTCGTGGTATCTTCGAAATTTTTCAATTCGCTTAGGTCTTGCTTCTATGAGAGGGAGATGAATTTTGATTCTGTTGCCAGATTCTTGGTTAGCTACCAGCATTTGACATTTTATCCTGTAATGTGCTTTgctagaattaatttattcgcCCAATCTTTCGCCTTACTGTTGTCCAAGAGAAAGGTACCCCATAGAGGGCAGGAGCTTTTGGCCTTGCTTGTTTTTTGGATTTGGTATCCTCTGCTGGTTTCATGCTTGCCCAATTGGGTTGAAAGAATATTGTTTGTCATTACCAGTTTCACTGTTACTGGAATACAACATGTTCAGTTCTGTTTGAATCATTTCTCATCCAGCGTGTATGTTGGCCCACCGAGTTCGAAAGATTGGTTGGAGAAGCAGACTAGTGGCTCCCTTGATGTAAAGTGCCCTGCTTGGATGGATTGGTTTCATGGTGGATTGCAATTTCAGGTGGAACATCATCTATTTCCCCGATTGCCCAGGTGCCACTTGAGGAAAATCTCACCTTTGGTGAAAGAACTGTGCAGAACACATACTTTACCTTATAACTGTGTGTCATTCTTGAAAGCCAATGCACTGACGCTTGAGACACTCCGCAATGCTGCATTGCAGGCACGCGATCTGTCTAATCCTATCCCCAGAAATTTAGTTTGGGAAGCTGTTAATACTCATGGATG 1556 0.4409 MDPSSQSFWVLKQFYGARSINPYHALSSYMSHVYHIQNHYAHSIQKERATGLSFNNRTSATPFCHWKGALQWESSESTFHSKNLADITNEEICGSVFRERSTNVSDWANDHPGGELPLFSLAGQDVADAFVAYHPGTAWQYLDKFFTGYYLQDYSVSEVSKDYRKLLSEFSKMDLFEKKGHGVFFALCFMALLFSLSVCGVLCSSSPWVHVASGGLMGFLWIQSGWIGHDSGHYQVMATRGFNRFAQLLAGNCLAGISIGWWKWNHNAHHIACNSLDFDPDLQHLPFFVVSSKFFNSLRSCFYEREMNFDSVARFLVSYQHLTFYPVMCFARINLFAQSFALLLSKRKVPHRGQELLALLVFWIWYPLLVSCLPNWVERILFVITSFTVTGIQHVQFCLNHFSSSVYVGPPSSKDWLEKQTSGSLDVKCPAWMDWFHGGLQFQVEHHLFPRLPRCHLRKISPLVKELCRTHTLPYNCVSFLKANALTLETLRNAALQARDLSNPIPRNLVWEAVNTHG 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02238 518 PANTHER FATTY ACID DESATURASE 2 98 517 IPR012171 GO:0016491
Bva06g02238 518 Pfam Cytochrome b5-like Heme/Steroid binding domain 103 150 IPR001199 -
Bva06g02238 518 CDD Delta6-FADS-like 211 471 - -
Bva06g02238 518 Gene3D - 70 157 IPR036400 -
Bva06g02238 518 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 98 517 - -
Bva06g02238 518 PIRSF FA_sphingolip_des 24 505 IPR012171 GO:0016491
Bva06g02238 518 Pfam Fatty acid desaturase 207 477 IPR005804 GO:0006629
Bva06g02238 518 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 102 153 IPR036400 -
Bva06g02238 518 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 69 160 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02238 Bva-Chr6 14631436 14633065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02238 87 518 Lipid Metabolism Gene Families AT3G61580 60.909 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02238 K21737 - tcc:18588068 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02238 06 14631436 14633065 Bva06g02238 06 14631436 14633065 ECH