Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02236 ATGGCTGACCAGGGTTATCCATCTTCCAAACCCAATGCCAATGGTACTAATGGCACCGCCGCCCCCGCCGGTAACGGCACTGGTCCTGTCAAATCTCAGCTCTACAATCCAAATCGCCAACTCTATCGCCCTCAATCCAATTACCACCGTCGTAAACGCTCCCACCGCAACctctgctgctgctgttgcttCTGGACCATACTCACAATCCTCGCCCTTGCACTCCTCGCGGCTATTGTCGGTGCCGCACTTTACGTCCTCTACCGCCCTCACCGACCCGAATTCTCCGTCACCAATCTCCGCATTGCCAAGATGAACCTCACCACTTCCCCTGATTCCTCCTCTCATCTCACCACGCTCTTCAACCTCACCCTCATAGCCAAAAACCCGAACAACCACCTCATTTACTTCTTCGACGCGTTCACCGTGACTGCCTTCTCCGATTCTGTGCAAATCGGTAATGGGTCTCTGCCGGCGTTCACTTCCGATAAGAACAACCAGACCAGCCTCCGAGGGATCCTGTCCAATTCCCAAGATCTGGACACTGACTCGTTAACTTCACTGAGATCGGgtctgaagaagaagaaagggttTCCAGTGGAGATTCAAATGGATACGCAAGTGAAGTTGAAGATGGATTGGCTCAAGAGCAAGAAGGTGGGAATTAGAGTTACGTGCGAAGGAATCAGAGGGACCGTACCCACTGGCAAGACTCCGTCGGTGGCTTTTGTGACAGACTCCGAGTGTAAGGTCGATCTTCGAATCAAGATCTGGAAATTCTCCTTTTA 788 0.4949 MADQGYPSSKPNANGTNGTAAPAGNGTGPVKSQLYNPNRQLYRPQSNYHRRKRSHRNLCCCCCFWTILTILALALLAAIVGAALYVLYRPHRPEFSVTNLRIAKMNLTTSPDSSSHLTTLFNLTLIAKNPNNHLIYFFDAFTVTAFSDSVQIGNGSLPAFTSDKNNQTSLRGILSNSQDLDTDSLTSLRSGLKKKKGFPVEIQMDTQVKLKMDWLKSKKVGIRVTCEGIRGTVPTGKTPSVAFVTDSECKVDLRIKIWKFSF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02236 262 Gene3D - 86 227 - -
Bva06g02236 262 Pfam Late embryogenesis abundant protein 127 226 IPR004864 -
Bva06g02236 262 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 1 261 - -
Bva06g02236 262 PANTHER HARPIN-INDUCED PROTEIN 1 261 - -
Bva06g02236 262 MobiDBLite consensus disorder prediction 1 36 - -
Bva06g02236 262 SUPERFAMILY LEA14-like 75 211 - -
Bva06g02236 262 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02236 Bva-Chr6 14626639 14627972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02236 37 227 EF-hand Containing Proteins AT5G21130 28.000 1.59e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02236 - - gmx:100786652 409.838