Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02228 ATGGCCGAATCTAGAAATGGAGCTGTGTTGCCCGGCCAAATAACAGTGAAGCGGCCAGACTCGCATAAACTTTTACAAAGATCGAACTCGTTGACGATAGAAGAGCGGATTTGTGCGGCGTTCGTACCATTTTTAGCTATAATCGAGGTTTTGATGTTCGGTATTGTCGATTGTTTCAACTGTCTGCCATGCATTCAGAAATGCCACTCTGGTGTTAAGGATATGACGCGCCTCGCTCAAGAAACAATATTTACTGTTAATGAAGTGGAAGCATTGTATGTGCTGTTTAAGAAGTTAAGTAGCTCGATAATTGATGATGGTTTGATCCACAAGGAGGAACTTCAATTAGCCTTATTTGGAActcaaaatggagaaaatctTTTCCTGAATCGAgtttttgatctttttgatgaaaagagaaatggCGTTATCgattttgatgaatttgtcCATGCACTCAATGTGTTCCATCCTAATGCCTctatagaagaaaaaacagacTTTGCTTTTAGGCTGTATGATCTAAGGAAAACTGGTTCAATTGAGAGAGAAGAAGTCAAGCAAATGGTTGTGGCCATCTTGATGGAATCTGACGTGGAACTTTCAGATGATCTTCTTGAAGCTATTGTTGACAAGACATTTGCTGATGCTGATTTGGACCATGatggtaaaattaataaagaaggGTGGAAAGCTTTTGTGAGTCGAAATCCATCAATCCTGAAGCACATGACCCTTCCTTATTTGAAAGATATTGCTTCCATGTttccaagttttatttttaatacggAGGTTGAAGATTG 803 0.3425 MAESRNGAVLPGQITVKRPDSHKLLQRSNSLTIEERICAAFVPFLAIIEVLMFGIVDCFNCLPCIQKCHSGVKDMTRLAQETIFTVNEVEALYVLFKKLSSSIIDDGLIHKEELQLALFGTQNGENLFLNRVFDLFDEKRNGVIDFDEFVHALNVFHPNASIEEKTDFAFRLYDLRKTGSIEREEVKQMVVAILMESDVELSDDLLEAIVDKTFADADLDHDGKINKEGWKAFVSRNPSILKHMTLPYLKDIASMFPSFIFNTEVED 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02228 267 Pfam EF-hand domain pair 164 227 IPR002048 GO:0005509
Bva06g02228 267 ProSiteProfiles EF-hand calcium-binding domain profile. 124 159 IPR002048 GO:0005509
Bva06g02228 267 SMART efh_1 165 193 IPR002048 GO:0005509
Bva06g02228 267 SMART efh_1 128 156 IPR002048 GO:0005509
Bva06g02228 267 SMART efh_1 209 237 IPR002048 GO:0005509
Bva06g02228 267 CDD EFh 165 235 IPR002048 GO:0005509
Bva06g02228 267 SUPERFAMILY EF-hand 75 258 IPR011992 -
Bva06g02228 267 ProSiteProfiles EF-hand calcium-binding domain profile. 161 196 IPR002048 GO:0005509
Bva06g02228 267 CDD EFh 129 190 IPR002048 GO:0005509
Bva06g02228 267 PANTHER CALCINEURIN B-LIKE PROTEIN 10 24 267 - -
Bva06g02228 267 Pfam EF-hand domain pair 106 152 IPR002048 GO:0005509
Bva06g02228 267 Gene3D - 74 267 - -
Bva06g02228 267 PRINTS Recoverin family signature 179 197 - -
Bva06g02228 267 PRINTS Recoverin family signature 132 153 - -
Bva06g02228 267 PANTHER CALCINEURIN B 24 267 IPR045198 GO:0005509|GO:0019722|GO:0019900
Bva06g02228 267 ProSiteProfiles EF-hand calcium-binding domain profile. 205 240 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02228 Bva-Chr6 14585205 14587943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02228 58 267 EF-hand Containing Proteins AT4G17615 59.048 1.01e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02228 K06268 - tcc:18588053 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02228 06 14585205 14587943 Bva06g02228 06 14585205 14587943 ECH