Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02219 ATGGCTGACGAAGCACAGTATTCATCGAGCACAGAAACCACGCCCCACAAGCGCAAGTATGAGGAGCCATCGCCGGCTTCTCAGAGACCCACCGGATTCTCGGCGCCTATTGCATCTTCATCGCCCGACGGTGCCCACGCGCCGCCTCCTTCCTATAATAGCGTGCCTCCCCCGTCAAGTGGGATTGAGCTTGCCAAGCAGCGTGCTCAGGAGGTCGCTGCACGGCTCTTAAACAACTATGGTGGTGGAGGAGGTGGTGGGTTGGATGCTAAGCGAACAAAAATTGACAATGGTGCTTCTGGATTCGATTCCATTGATACGAAGCCGTCATTTTCAGCTGCTTCTGCTGCTCCTGTATCGTATGCTTATCAGGGTACGAGCAAAAAGATAGATGTGCCTAATGGCAGGGTTGGTGTGATTATTGGTAAAGGTGGAGAGACGATCAAATATCTTCAAATACAGTCTGGGGCGAAGATCCAAGTTACCCGTGATGCGGACGCTGACCCCAATTCTCCAAATAGGATGGTAGAGCTTATGGGTACTCCTGATCAAATTGCCACAGCTGAGCGTTTGATAAAAGAAGTACTTAATGAGGCTGAAACTGGAGGCTCTGCCATAGTTTCTAGACGTTTGACTGGTCAAACTGGGTCTGAACAATTTGTGATGaaaattccaaataataaGgTTGGCCTTGTAATTGGTAAAGGAGGAGAAACAATAAAGCATATGCAAGCACAGACTGGAGCACGAATTCagGTGATACCTTTGCATCTTCCTCCAGGTGACATGTCCACAGAAAGAACATTGCAAATTGATGGGACGACTGAACAAATTGAGTCTGCAAAAGAGTTGGTTAATCAAGTCATAAGCGAGAATCGTCTTAGAAATCCAGGAATGGCTGGTGGTTATTCTCAGCAAGGTTACCAAACACGGCCACAGTCTACCTGGGTTCCCCCTGGTCCTCCTATGCAACAACCTGGTTATAACTATGTGCAGCCTGGAGCATACTCTGGTCCATCACCTCAATATAACATGCCTCAGCCATCATATCCAGGTTATCCTCCGCAATCTGGTGGATATTCTACCACTTGGGACCAGTCTACAATACCTCCTTCCCAGCAGTCTGCTCAGGGTAGTAGTTATGATTACTATAGTCAACAGCCACATCAAAATCCTGGTGGCCCAGCACCTCCGGCTGATGGGACTGCGTATAATTACAGTCAGACACCGTCTTCTGATTATAACCAACACGCTCAAGGTTATGGTCAGGACAACTATGGTGGGTATCATGCACCACCTCAATCAGGGTATGGTCAGCCACCAACATATGATCAGCAGCAAGGCTACAACTCAGCCCCTGGCTATGGTAACGGGGGCAACACAGCACAAGAGGGCCACACTTCTAACTATGGATCTCAGGGGGATACCGCTCAGGCTACTCCTGTCCAACCTTCTTCAATGGCCCAGCAAGCTAGCCCAAACCCTGCTAACTATCCATCTCGAGGAAATGCTCAGTCAGGTTATGGGATTCCACAAGCACCGTATGGGAATCTACCACCAGCACATTCCGGTTATGGTCCTGGTTATGGGCCCCCCAATTCCCAAAAACCAAGCGCCAACCCTCCTGTTTATGGACAGTCCATGCAATCACCTAGCACAGCAGGGAGCTATGGTCAATCTGGCCCTTTGCAACCTGGATATGCTGCTTCTCACCCCCCGCCTTCTGGGTACTCTCAACCAGAATCCGGTTCTCAAAGGGCACCGCCATCTGGTTTTGGTTCTGCTGTGCAGCCAGGTTATGGTCAAGCACCACCATATGGTGCTCCTGCAGCAGGGGCTCAGCCTGGTTATGGTCAAGCACCGCCACCATATAGCAGCAGTTATGGTGCTGGTTACACCCAGCCTCCGGCGTATTCTAGTGATGGAACACCTGCACAGACTGGACAACAAGGTGGTGTTGGCAAGGCGTCACCTCAGAGTTG 1982 0.499 MADEAQYSSSTETTPHKRKYEEPSPASQRPTGFSAPIASSSPDGAHAPPPSYNSVPPPSSGIELAKQRAQEVAARLLNNYGGGGGGGLDAKRTKIDNGASGFDSIDTKPSFSAASAAPVSYAYQGTSKKIDVPNGRVGVIIGKGGETIKYLQIQSGAKIQVTRDADADPNSPNRMVELMGTPDQIATAERLIKEVLNEAETGGSAIVSRRLTGQTGSEQFVMKIPNNKVGLVIGKGGETIKHMQAQTGARIQVIPLHLPPGDMSTERTLQIDGTTEQIESAKELVNQVISENRLRNPGMAGGYSQQGYQTRPQSTWVPPGPPMQQPGYNYVQPGAYSGPSPQYNMPQPSYPGYPPQSGGYSTTWDQSTIPPSQQSAQGSSYDYYSQQPHQNPGGPAPPADGTAYNYSQTPSSDYNQHAQGYGQDNYGGYHAPPQSGYGQPPTYDQQQGYNSAPGYGNGGNTAQEGHTSNYGSQGDTAQATPVQPSSMAQQASPNPANYPSRGNAQSGYGIPQAPYGNLPPAHSGYGPGYGPPNSQKPSANPPVYGQSMQSPSTAGSYGQSGPLQPGYAASHPPPSGYSQPESGSQRAPPSGFGSAVQPGYGQAPPYGAPAAGAQPGYGQAPPPYSSSYGAGYTQPPAYSSDGTPAQTGQQGGVGKASPQS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02219 660 MobiDBLite consensus disorder prediction 354 390 - -
Bva06g02219 660 MobiDBLite consensus disorder prediction 575 591 - -
Bva06g02219 660 ProSiteProfiles Type-1 KH domain profile. 125 192 - -
Bva06g02219 660 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 127 201 IPR036612 GO:0003723
Bva06g02219 660 CDD KH-I 220 285 - -
Bva06g02219 660 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 69 647 - -
Bva06g02219 660 Pfam KH domain 129 194 IPR004088 GO:0003723
Bva06g02219 660 Pfam KH domain 221 286 IPR004088 GO:0003723
Bva06g02219 660 Coils Coil 271 291 - -
Bva06g02219 660 MobiDBLite consensus disorder prediction 438 507 - -
Bva06g02219 660 MobiDBLite consensus disorder prediction 626 660 - -
Bva06g02219 660 ProSiteProfiles Type-1 KH domain profile. 217 285 - -
Bva06g02219 660 SMART kh_6 124 197 IPR004087 GO:0003676
Bva06g02219 660 SMART kh_6 216 290 IPR004087 GO:0003676
Bva06g02219 660 Gene3D K Homology domain, type 1 121 212 IPR036612 GO:0003723
Bva06g02219 660 Gene3D K Homology domain, type 1 213 314 IPR036612 GO:0003723
Bva06g02219 660 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 219 292 IPR036612 GO:0003723
Bva06g02219 660 MobiDBLite consensus disorder prediction 539 560 - -
Bva06g02219 660 MobiDBLite consensus disorder prediction 292 660 - -
Bva06g02219 660 MobiDBLite consensus disorder prediction 402 422 - -
Bva06g02219 660 CDD KH-I 127 193 - -
Bva06g02219 660 PANTHER K DOMAIN-CONTAINING PROTEIN-RELATED 69 647 - -
Bva06g02219 660 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02219 Bva-Chr6 14542656 14547956 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02219 K13210 - jre:109008855 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02219 06 14542656 14547956 Bva06g02219 06 14542656 14547956 ECH