LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva06g02207	ATGGATTTCATGAAGGTTTTCGATCAAGCGGTTCGAGAAATaaagagagaggtGAATCTGAAGGTACTCAAGGTTCCCGAAATCGAACAGAAGGTTTTGGATGCTACTGACAATGAACCTTGGGGTCCGCATGGTTCTGCACTGGCAGAGATTGCCGACGCTaccaaaaaattTACTGAATGCCAAATGGTCATGAATGTCCTTTGGACAAGACTGAGTGAGACTGGAAAAGATTGGCGTTATGTATACAAGGCATTAGCTGTTATAGAGCATTTGATAGCAAATGGATCTGAACGTTCAGTTGATGACATTATAGAACATACTTTTCAGATCTCAGCACTTTCTAGTTTTGAATATGTTGAGCCCAATGGGAAGGATGTGGGAATCAATGTTAGAAAGAAGGCAGAAACCATTGTGGCTCTCTTGaataataaagataagatACAAGAAGTCAGAAACAAGGCTGCTTCAAACCGTGACAAATACTTTGGCCTTTCTTCTACTGGTATTACATATAAGTCTGGGTCAGCCTCATTTAGTAGTGGCAGCTACCAAAGTAGTAATACATATGGAGGCTTTAGTTCAAGAGATGGTGACAGGTTCAGGGATAGTTATAGAGACAAGGGTCACTATGAAGATGAGAAAGTTGAGAAAGATTACTCTGAAAAATCACGTCATGGTGTCACAAGCGACATTCAAGGGAGCTCTTCTAAGAAGGGTTCTGCACGCTCTGTAAGCAAAAACCAGGATGTTATGCCTTCCAGAGTATCAAAGTCATCAGATGACATTGATAACTATAGTTCAATTCCATCCCAAAATTCGACTGTACCTTCAAACAGTAATGAGGATGATTTTGATCCTAGGGGCACTTCTTCTACTACTAAGGCTTCAGCTGGAAGCTCTAACCAGGTTGATCTCTTTGGAGGAGATCTACTTGGTGACCTCACGGATGCTCCAACTCCTATTCCCTCAGAAAAGCCTGCCACAAGTGTGTCAGAGGTTGATCTGTTTTCAGATGCTGCGTTTGTATCAGCAGAGCCTCATGTAGAGAAAGAAGCTAGTTCTCAACAGCAGGCACAGAATGAGATTGATCTATTTGCTTCCCAACCAGCAATTTCTTCTTCAGTTACATCAACGGTTGACTTGTTTTCAATTCCTGAACCAGTTGTGCAGCCAGACAGCCAGTCCAAAAACTCTGCTCCCCCAAATAATGACATTGTTGATCCTTTTGCAGCTGTTCCGCTTAATAAGTTTGATGGATCTGATCCTTTTGACGAATTTACTTCTAATTATGATTCAGCATCTTCACAGCCCTCAAAAAGTCCTGTCAGTGATGGCAATAGTGATAATATGAATGGTAAATTAATGGCAGAGTCTAAAAATCCACTGAAGAAGGATCCTTTCCAGGTGAAGTCTGGTATTTGGGCAGATTCGCTAAGCCGAGGATTGATTGACCTCAATATATCTGCTCCAAAGAAGGTATCCCTGGCGGATGTTGGAATTGTGGGAGGATTGAGTGATGGATCGGATGAAAAGGAGAAAGGTCTTCCACCAGCTTTTCACATGGGGAGAGCCATGGGAACTGGATCTGGTCTTGGTAGGACTGGGTTCACTCCTTCACAGGCATCAGTAGGAGACGACATATTTTCAAACCTAAGCGGCCAGCAGCAATACCAATTTGGTGGGTTCCAAAAGTA	1697	0.419	MDFMKVFDQAVREIKREVNLKVLKVPEIEQKVLDATDNEPWGPHGSALAEIADATKKFTECQMVMNVLWTRLSETGKDWRYVYKALAVIEHLIANGSERSVDDIIEHTFQISALSSFEYVEPNGKDVGINVRKKAETIVALLNNKDKIQEVRNKAASNRDKYFGLSSTGITYKSGSASFSSGSYQSSNTYGGFSSRDGDRFRDSYRDKGHYEDEKVEKDYSEKSRHGVTSDIQGSSSKKGSARSVSKNQDVMPSRVSKSSDDIDNYSSIPSQNSTVPSNSNEDDFDPRGTSSTTKASAGSSNQVDLFGGDLLGDLTDAPTPIPSEKPATSVSEVDLFSDAAFVSAEPHVEKEASSQQQAQNEIDLFASQPAISSSVTSTVDLFSIPEPVVQPDSQSKNSAPPNNDIVDPFAAVPLNKFDGSDPFDEFTSNYDSASSQPSKSPVSDGNSDNMNGKLMAESKNPLKKDPFQVKSGIWADSLSRGLIDLNISAPKKVSLADVGIVGGLSDGSDEKEKGLPPAFHMGRAMGTGSGLGRTGFTPSQASVGDDIFSNLSGQQQYQFGGFQK	565

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva06g02207	565	MobiDBLite	consensus disorder prediction	388	403	-	-
	Bva06g02207	565	Gene3D	-	24	163	IPR008942	-
	Bva06g02207	565	MobiDBLite	consensus disorder prediction	388	410	-	-
	Bva06g02207	565	SUPERFAMILY	ENTH/VHS domain	7	152	IPR008942	-
	Bva06g02207	565	MobiDBLite	consensus disorder prediction	196	226	-	-
	Bva06g02207	565	MobiDBLite	consensus disorder prediction	522	548	-	-
	Bva06g02207	565	MobiDBLite	consensus disorder prediction	426	455	-	-
	Bva06g02207	565	MobiDBLite	consensus disorder prediction	177	194	-	-
	Bva06g02207	565	Pfam	ENTH domain	27	147	IPR013809	-
	Bva06g02207	565	SMART	enth_2	26	152	IPR013809	-
	Bva06g02207	565	MobiDBLite	consensus disorder prediction	177	330	-	-
	Bva06g02207	565	ProSiteProfiles	ENTH domain profile.	20	152	IPR013809	-
	Bva06g02207	565	PANTHER	EPSIN/ENT-RELATED	1	555	-	-
	Bva06g02207	565	MobiDBLite	consensus disorder prediction	227	304	-	-
	Bva06g02207	565	CDD	ENTH	28	144	-	-
	Bva06g02207	565	PANTHER	CLATHRIN INTERACTOR EPSIN 1	1	555	IPR033521	GO:0006623\|GO:0030276
	Bva06g02207	565	MobiDBLite	consensus disorder prediction	424	460	-	-
	Bva06g02207	565	MobiDBLite	consensus disorder prediction	533	548	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva06g02207	Bva-Chr6	14475376	14479764	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva06g02207	K12471		-	gmx:100809198	778.089

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva06g02207	06	14475376	14479764	Bva06g02207	06	14475376	14479764	ECH