Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02203 ATGAAGAGGTTTTCAGCCTGCTGCTTCACAAACAGAATCTTCAAGTCTCAGTCCCACTGCAAGCGCAAGCATCCTCAGAGTTCCAAAGAAACTATGGAAAACCCACAGAAGAACAATGCTTGCGGCGATTCAGAGatcaaaaatagaagtaaCTCTGGTCCAAGCAGTGCATTGGCTGCAAATATCATACTGAACCATGACTTCTCAGGAGGGCTGAACTCTTGGCATCCCAACTATTGCGATGGCTATATAATTTCTGCAGGTTCTCAGGGAAGTTCATCGACAAATTCAGGTGGCAATTATGCTGTTGTAACCAATCGTAAAGAATGCTGGCAAGGTCTCGAACAAGACATCACTAGCAGAGTTTGCATTGATTCCAGTTACAAGGTTTCAGCTTGTGTAGGGGTTTCTGGGGCTGTTCAGGGATCTGCTGAAGTTAAAGCTACCCTAAAACTAGAGTATAGAGATTCAGCTACGGATTACTTATTCATTGGCAgAATTTCAGTTACAAAGGATGGCTGGGAGAACTTGGAGGGGACATTTTCCTTGTCAACTATGGCTGATcggattatattttatctagaAGGACCTGCTCCTGGAGTCGACCTGCTTATACAATCAGTAGAGATCACCGGTTCCAGCAATAACAGCAAGGCTACAAATATCATACTGAACCATGACTTCTCAGGAGGGCTGAATTCTTGGCATTCCAATTGTTGCAATGGCTATGTAATTTCGGCTGGATCAGGTTCTCAAGGAGGTTTATCAATGAATTCAGGTGGTAATTATGCTGTTGTAACCAATCGTAAAGAATGCTGGCAAGGTCTCGAACAAGACATTACTAGCAGAGTTTGCGTTGGTTCCAGTTACAAGGTTTCAGCTTGTGTACGTGTATCTGGGGCTGTTCAGGGATCTGCTGATGTTCAAGCTACTCTAAAACTAGAATATAAAGATTCAGCCACAAGTTACTTGTGCATTGGCAGAACTTCTGTGACAAAGGATAGCTGGGAGAAGTTGGAAGGCACATTTTCCTTGTCAACTGTGGCTGATCGGGTTATATTCTATCTAGAAGGACCTGCTCCTAGAGTTGACCTGCTAATACAAGCAGTAGAGATCACTGGTTCCAGTTCAACTGAAGATCATAATACAAGCAAGGGATGTGCTTCTGCTGGAGATGACAACATTATAATAAACCCCAACTTTGAAGATGGCCTGAATAACTGGTCCGCAAGAGGCTGTAAGATTGTATTACATGATTCCATTGGAGATGGTAAAATTCTGCCAAAGTCTGGGAAATATTTTGCATCTGCAACAGAGCGCACTCAAAGCTGGAATGGAATTCAGCAGGATATCACTGGAAGAGTGCAACGCAAGCTTGCCTATGAGGTCACCGCTTTAGTTCGGATATACGGGAACAATGTCACTTCTGCCGATGTTAGGGCTACTTTGTGGGTTCAAGCACCAGATCTTCGAGAGCAGTATATAGGCATTGCCAATGTGCAGGCCACAGACAAAGATTGGGCTCAGTTGCAGGGAAAGTTTCTTCTAAATGGTTCTCCGTCAAAGGTGGTGGTTTATTTAGAAGGTCCTGTTGCAGGCACTGACATTCTTGTGAATAGTTTTGTCATAAAGCATGCAGCTAAATCACCTCCTTCAACACGCCCAGATATTCAGAATGCTGCTTTTGggattaatataattgaaaacagCAATTTGGTTGACGGCACCAAAGGATGGTTTCCTCTTGGGAATTGTACTTTAAATGTTGAAACTGGTTCACCGCATATAATTCCACCAATGGCAAGAGACTCCCTAGGGCCTCACGAACCCTTGAGTGGGCGCTACATCCATGTGACCAACCGCACACAAAATTGGATGGGTCCTGCTCAGATGATCACTGATAAATTGAAACTCTTTCTGACTTATCAAGTATCAGCTTGGGTTCGGATTGGTTCAGGATCAAGTGGTCCACAGAATGTGAATGTTGCCCTTGGTGTTGACAATCAGTGGGTTAATGGAGGACAAGCTGAGGTTGCTGATGATAGATGGCATGAAATTGGTGGGTCCTTCAGAATCGAGAAGCAACCATCAAAGGTTATGGTTTATATCCAAGGTCCTGCTCCAGGTGTAGACTTAATGGTTGCTGGACTTCAGATTTTCCCCGTTGATAGACATCAAAGGTTTAGATGTTTAAAGAGGCAGACAGACAAGATCCGTAAGCGTGACGTTATCCTGAAATTCTCTGGAGTGGACTCAAGCAGCTGTCTGGGAACCTTGGTTAAAGTCCGACAAATACAGAACGATTTTCCAGTTGGATCATGTATCAGCCGAACAAACCTTGACAACGAAGATTTTGTTAACTTCTTTCTGAAACATTTTAATTGGGCTGTGTTTGGGAATGAGTTGAAGTGGTATTGGACGGAGGCACAGCGGGGAAATTTCAACTACAAGGATGCTGATGAGATGTTAGACTTTTGTCAGAAAAACAAGATAGAAGCTCGCGGTCATTGTATCTTTTGGGAAGTGGATGGTACTGTTCAGCAGTGGGTTAAATCACTTAACAAGAATGACTTGATGACTGCTGTCCAAAATCGCTTAAATGGCCTTCTTACTCGCTACAAGGGCAAGTTCAGGCACTATGATGTTAATAATGAGATGATGCATGGTTCATTTTATCAAGATAGACTAGGTAAAGATATCAGGGCAAACATGTTCAAGACTGCACACCAACTAGATCCATCTTCAACACTGTTTGTGAATGATTATCATGTTGAAGATGGATGTGACACCAGATCATCTCCAGAAAAATACATACAACATGTTCTTGATTTGCAAGAGCAAGGTGCACCTGTTGGAGGGATAGGAATTCAAGGTCATATAGACAGTCCTGTTGGGCCTATTGTTTGTTCTGCTCTTGATAAATTGGGTATTCTGGGTTTGCCAATCTGGTTTACTGAGCTTGATGTTTCTTCTACCAATGAATATGTGAGAGCAGACGATTTAGAAGTTATGATGCGGGAACTTTATGCTCACCCTGCTGTAGAGGGTATCATGCTGTGGGGATTTTGGGAATTGTTTATGAGCAGGGATAATTCACACTTGGTGGATGCAGAAGGTGATATCAATGAAGCTGGGAAAAGATACCTTGCCATTAGACAAGAGTGGCTGTCACACAGCCATGGCCATGTTGATGAGCAAGGACAGTTCAGCTTCAGAGGCTTCCATGGAACATACAACGTGGAAGTTGTCTCCTTATCAAAGAAGGTTTCTAAGACATTTGTAGTTGATAAGGGTGATTCGCCACTGGTGATATCCATCGACTTATA 3326 0.4257 MKRFSACCFTNRIFKSQSHCKRKHPQSSKETMENPQKNNACGDSEIKNRSNSGPSSALAANIILNHDFSGGLNSWHPNYCDGYIISAGSQGSSSTNSGGNYAVVTNRKECWQGLEQDITSRVCIDSSYKVSACVGVSGAVQGSAEVKATLKLEYRDSATDYLFIGRISVTKDGWENLEGTFSLSTMADRIIFYLEGPAPGVDLLIQSVEITGSSNNSKATNIILNHDFSGGLNSWHSNCCNGYVISAGSGSQGGLSMNSGGNYAVVTNRKECWQGLEQDITSRVCVGSSYKVSACVRVSGAVQGSADVQATLKLEYKDSATSYLCIGRTSVTKDSWEKLEGTFSLSTVADRVIFYLEGPAPRVDLLIQAVEITGSSSTEDHNTSKGCASAGDDNIIINPNFEDGLNNWSARGCKIVLHDSIGDGKILPKSGKYFASATERTQSWNGIQQDITGRVQRKLAYEVTALVRIYGNNVTSADVRATLWVQAPDLREQYIGIANVQATDKDWAQLQGKFLLNGSPSKVVVYLEGPVAGTDILVNSFVIKHAAKSPPSTRPDIQNAAFGINIIENSNLVDGTKGWFPLGNCTLNVETGSPHIIPPMARDSLGPHEPLSGRYIHVTNRTQNWMGPAQMITDKLKLFLTYQVSAWVRIGSGSSGPQNVNVALGVDNQWVNGGQAEVADDRWHEIGGSFRIEKQPSKVMVYIQGPAPGVDLMVAGLQIFPVDRHQRFRCLKRQTDKIRKRDVILKFSGVDSSSCLGTLVKVRQIQNDFPVGSCISRTNLDNEDFVNFFLKHFNWAVFGNELKWYWTEAQRGNFNYKDADEMLDFCQKNKIEARGHCIFWEVDGTVQQWVKSLNKNDLMTAVQNRLNGLLTRYKGKFRHYDVNNEMMHGSFYQDRLGKDIRANMFKTAHQLDPSSTLFVNDYHVEDGCDTRSSPEKYIQHVLDLQEQGAPVGGIGIQGHIDSPVGPIVCSALDKLGILGLPIWFTELDVSSTNEYVRADDLEVMMRELYAHPAVEGIMLWGFWELFMSRDNSHLVDAEGDINEAGKRYLAIRQEWLSHSHGHVDEQGQFSFRGFHGTYNVEVVSLSKKVSKTFVVDKGDSPLVISIDL 1108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02203 1108 PANTHER GLYCOSYL HYDROLASE 383 1108 IPR044846 GO:0004553|GO:0005975
Bva06g02203 1108 PANTHER - 222 370 - -
Bva06g02203 1108 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 979 989 IPR031158 -
Bva06g02203 1108 Pfam Carbohydrate binding domain 393 530 IPR003305 GO:0016798
Bva06g02203 1108 Pfam Carbohydrate binding domain 221 360 IPR003305 GO:0016798
Bva06g02203 1108 Pfam Carbohydrate binding domain 565 708 IPR003305 GO:0016798
Bva06g02203 1108 Pfam Carbohydrate binding domain 60 199 IPR003305 GO:0016798
Bva06g02203 1108 SUPERFAMILY (Trans)glycosidases 760 1059 IPR017853 -
Bva06g02203 1108 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 753 1051 IPR001000 GO:0004553|GO:0005975
Bva06g02203 1108 Pfam Glycosyl hydrolase family 10 765 1022 IPR001000 GO:0004553|GO:0005975
Bva06g02203 1108 Gene3D Glycosidases 755 1062 - -
Bva06g02203 1108 Gene3D - 559 720 - -
Bva06g02203 1108 Gene3D - 214 374 - -
Bva06g02203 1108 Gene3D - 55 212 - -
Bva06g02203 1108 Gene3D - 387 546 - -
Bva06g02203 1108 SUPERFAMILY Galactose-binding domain-like 563 724 IPR008979 -
Bva06g02203 1108 SUPERFAMILY Galactose-binding domain-like 392 546 IPR008979 -
Bva06g02203 1108 MobiDBLite consensus disorder prediction 19 53 - -
Bva06g02203 1108 SMART glyco_10 802 1052 IPR001000 GO:0004553|GO:0005975
Bva06g02203 1108 PANTHER - 60 208 - -
Bva06g02203 1108 SUPERFAMILY Galactose-binding domain-like 60 213 IPR008979 -
Bva06g02203 1108 PANTHER - 383 1108 - -
Bva06g02203 1108 SUPERFAMILY Galactose-binding domain-like 220 375 IPR008979 -
Bva06g02203 1108 MobiDBLite consensus disorder prediction 31 53 - -
Bva06g02203 1108 PANTHER GLYCOSYL HYDROLASE 222 370 IPR044846 GO:0004553|GO:0005975
Bva06g02203 1108 PANTHER GLYCOSYL HYDROLASE 60 208 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02203 Bva-Chr6 14450341 14457170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02203 1 543 Glycoside Hydrolase AT1G58370 35.852 1.89e-102 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02203 - - pxb:103951721 1660.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00598 10 5312009 5316337 Bva06g02203 06 14450341 14457170 BWGD
Bva06g02203 06 14450341 14457170 Bva06g02203 06 14450341 14457170 ECH