Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02199 ATGATTAAAAGGACTGCGAGCTTCCGAGGATTGCTTCTTCGAGTTGCTTCTTCTTCGTTCCCATCCAAGAGCGGAGTTCGTCGAGGCTGTGCGTCTCAGGCATCTGCTGTACAACGAATGATCGAACCATCGCCTTACAGTGAAGATGAGTATGCTGATGTGGACTGGGATAATCTCGGATTTGGACTCAGGCCAACTGATTACATGTACATCAACAAATGTGAGGATGCCGAGTTTGGACAAGGACAACTTAGTCCGTTTGGAAACCTTAAGTTAAGCCCTTCAGCTGGAGTTCTAAACTACGGCCAGGGATTATTTGAAGGTACAAAAGgatacagaaaagaaaatgggcaCATACTTCTCTTCCGTCCAGAACAAAACGCCCTTCGCATGAAGATTGGTGCCGAAAGAATGTGCATGCAATCACCTTCCATTGATCAATTTGTTGATGCCTTGAAGCAAACTACCCTGGCTAATAGGCGTTGGGTTCCTCCTCCGGGGAAAGGATCCTTGTACCTCAGACCTCTGCTGATAGGAACTGGTCCTGTACTGGGTTTGGCTCCAGCGTCTGAATACACATTCCTGATATATGCTTCCCTGTTGGAGGGTACAGCACCACTCAACTTGTATGTGGAAGAGGATTTTGACCGTGCTTCACGTCGTGGAACTGGAGGCGTCAAGACCATTTCTAATTACGCCCCCGTATTGAAGGCGCAAACTAGAGCCAAGAGCAGAGGGTACTCAGATGTGCTATATCTCGATTCTGCCACTAAGAAGAATCTGGAGGAGGTCTCTTCGTGTAACATTTTTATTGCAAAGGGGAAAGCCATCTCAACACCTGCGACAAATGGAACTATTCTAGCCGGAATTACCAGAAGATCTGTCATTGAACTTGCTTGTGATCATGGCTACCAGGTAGATGAGCGCGTTATTCAAGTGGATGAATTGGTTGATGCTGATGAAGTTTTCTGCACTGGAACTGCTGTTGGTGTTGCTCCCGTAGGAAGTATCACGTACCAGGGTAAAAGGATGGAATACAAAACGGGTTCTGGAACCATTTGTGAAGAATTGAATGCCACCCTAATAGGTATCCAAAGGGGTATTATTGAAGACAAGAAAGGATGGGTCATTGAGATTGACTG 1142 0.4545 MIKRTASFRGLLLRVASSSFPSKSGVRRGCASQASAVQRMIEPSPYSEDEYADVDWDNLGFGLRPTDYMYINKCEDAEFGQGQLSPFGNLKLSPSAGVLNYGQGLFEGTKGYRKENGHILLFRPEQNALRMKIGAERMCMQSPSIDQFVDALKQTTLANRRWVPPPGKGSLYLRPLLIGTGPVLGLAPASEYTFLIYASLLEGTAPLNLYVEEDFDRASRRGTGGVKTISNYAPVLKAQTRAKSRGYSDVLYLDSATKKNLEEVSSCNIFIAKGKAISTPATNGTILAGITRRSVIELACDHGYQVDERVIQVDELVDADEVFCTGTAVGVAPVGSITYQGKRMEYKTGSGTICEELNATLIGIQRGIIEDKKGWVIEID 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02199 380 CDD BCAT_beta_family 91 367 IPR033939 GO:0004084|GO:0009081
Bva06g02199 380 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 12 380 - -
Bva06g02199 380 PANTHER AMINO ACID AMINOTRANSFERASE 12 380 IPR005786 GO:0004084|GO:0009081
Bva06g02199 380 PIRSF BCAT1 32 380 IPR005786 GO:0004084|GO:0009081
Bva06g02199 380 Gene3D - 207 379 IPR043132 -
Bva06g02199 380 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 46 376 IPR036038 GO:0003824
Bva06g02199 380 Pfam Amino-transferase class IV 104 337 IPR001544 GO:0003824
Bva06g02199 380 Gene3D - 31 206 IPR043131 -
Bva06g02199 380 ProSitePatterns Aminotransferases class-IV signature. 263 292 IPR018300 GO:0003824
Bva06g02199 380 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 81 379 IPR005786 GO:0004084|GO:0009081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02199 Bva-Chr6 14417134 14420566 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02199 K00826 - gmx:100818776 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02199 06 14417134 14420566 Bva06g02199 06 14417134 14420566 ECH