Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02180 ATGTGTGAGAGAAATGTATCATCTTATCACTGCCTAGAGCTGTTTGTAGGGAGCATTTGGTGTTCAATGTCAAGTAATTCTCAGCCCTCTGGTATGCAGTTTCGGCCAGTGATTCCAGCCCAGCAAGGGCAACCATTTGTTCCAATGGGTTCACAACAATTTGGACATGCTGGACAAGGTAATGTTGGGATGCCAGTTGTTCAAAGCCAGCAACATCAGTATTCTCAACCGATGCAACACTTAGGTCCAAGACCTATCCAGCCTGGTCATCCTGCACCTTCGCTATACGTTCAGACAAATAGGCCGCTCACATCTGGTCCACCGCACCCTCAGCAAACTATTCCCCATTTAAGTAACCATATGCCTGGTGTGGCTGTTTCAGGAGCGCCACCTCATTCTTCATACACTTTCACACCGTCTTATGGCCAGCCGCAAGATAATGTCAATGTCAATGGATTTGCTCAATACCAGCCTTCGTCACAAGTGCATGCACCTACTGTGGGACAATCTTGGTTATCGTCAGCATCTCAAAGTGTGGCACCTGTTGCACAAGCACAGCATCCTGGAATACAATCATCCAGTACTACATCAACTGATGCGGCAACGACTGCCCCTAGTCAGCAATCATCTTCTGATTGGCAAGAGCATACTTCTGCTGATGGGAGAAGATATTACTACAATAAGAGGACCAGACAATCTAGTTGGGAAAAACCTTTGGAATTAATGTCACCAATTGAGAGGGCTGATGCATCAACTGTTTGGAAAGAATTCACTTCTGCAGAGGGAAGAAAatattacTACAACAAGATTACACAGCAGTCTACATGGACAATACCGGAGGAACTTAAGttGGCTCGTGAACAGGCTCAAAAAGCTGCTAGCCAAGGAATGCAATCAGAAACAAGTGGTACACCCATTGCTACTGATGTCTCCTCAGCTGAAATATCTGCTGCAGTTAATTCAGTCGGCTCCAATGCTTCTTCTACATCAACTGGAGTTATTTCTAGCCCAGTTTCTGTCGCACCCATTCCTGCCACTAGCACTCCTCTCCAGTTGGTTGCAACTACCTCAAGCCCTACTGTTGTTGAACCAAGTCCAGTGGTATCTATGAATTCTGCGCTTACTGGAGTTGCAGGAAGCTTAGGAGGAGCTGCTAATTCACATGATTCCAACATGTCATCCATTGTTGAAAACCAAGCATCTCATGGTGTTTCTACTTCAGTAGATGGAGCTTCTCTTCAAGACATTGAGGAAGCCAAAAGAGGAATGCCAGTGGCtggaaaaattaatgtgaCTTCAATAGAGGAGAAAGCAAATGATGATGAACCCTTGGTATATGCTAATAAGCTGGAGGCGAAAAATGCATTTAAAGCACTTCTGGAATCTGCAAATGTTCAGTCTGATTGGACTTGGGAACAGGCAATGAGAGAGATCATCAATGATAAAAGATATACTGCTTTAAAAACACTTGGTGAGCGAAAACAAGCTTTTAATGAGTACTTGGGTCAAAGGAAGAAGCTAGAGGCTGAAGAGAGGCGCATGAGGCAGAAAAGGGCTCGGGAGGAATTTACAAAGATGTTGGAAGAGTGCAAGGAGCTTACATCATCTACTAGATGGAGTAAAGCTGTAAGTATGTTTGAAAATGATGAACGGTTCAAGGCTGTTGAACGAGCTAGAGATCGAGAAGATCTATTTGACACTTACTTGATGGATCTTGAGAAGAAGGAAAGGGAAAATGCTGCTGAGGAACTCAACCGGAATAAAGCAGAATACAGGAAATTTCTGGAGTCCTGTGATTTTATCAAGGTTTCTAGTCAATGGCGGAAAGTCCAGGATCGATTAGAGGATGACGAAAGATGCTCACGACTTGAAAAACTAGACCGCTTGCTTATTTTCCAGGATTATATTCGTGACTTGGAGAAGGAAGACGAGGAGAAAAAACGAACAAAGAAGGAACAACTCCGACGGAGTGAAAGGAAAAACCGTGATGCATTTCGGAAGTTGTTAGAAGAACACATTGATACTGGGATTCTTACTGCTAAAACACGCTGGCGAGAATATTGTTTGAAGGTCAAAGATTTACCCCAATATCAAGCTGTTGTGTCAAACACCTCCGGTTCAACTCCAAGAGATTTATTTGAGGAAGTCGCTGAAGATCTTGAAAAGCagTATCATGAGGATAAGGCACGGATTAAAGATGTCATCAAGTTAGGCAAGTTTGTCGTGGTTTCTACGTCAGCTTTTGAGGACTTTAAGGCCGCTGTGATTGAAGATGATCATCCACCTATATCTGAGATAAATTTGAAGCTTATATATGAAGATTTCTTAGAGAAAGCCaaggagaaggaagagaaagaagctaAGAAGCGTCAACGCCTTGCTGAAGAGTTTACTGAGCTGCTACATTCGTTTAAGGATATTACTGCTTCTTCAACATGGGAAGATTGCAAACCACTTATTGAGGAAACACAAGAGTACAGATCAATTGGGGATGAGAGCGTTGGTAGAGAGGTTTTTGAGGAATACATTACACACCTGAAGGGAAAAGCTAAAGAGAAGGAACGGAAGCGCGAGGAGGAAAAAgccaaaaaggaaagagagagagaagagaaagagaaacggaaggagaaggaaaaggatAAGGAAAGAGACCGTGAGAAGGAGCGACATAAGAAGGACGAAACAGATAGTGAAAACCTGGATGTAACTGATAATCATGGTTACAAAGaggacaagaaaaaagaaaaggataaagaAAGGAAGCATCGGAAGAGGCACCAAAGCAGCACAGAGGATGTGGACTCTGAAAGGGAGGAGAAGGAGGATTCTAAAAAATCACGTAGACATGGTAGTGACCGCAAAAAGTCCAGAAAgCATGCAAACTCACCTGAATCTGACAACGAAAGTCGGCATAAAAGACACAAGAGGGATCGCCGCGATGGTTCCAGGAAAACTGGGGTTTATGACGACCTTGAAGATGGGGAGCTTGGTGAAGATGGAGAGATTCGGGGACACTG 3017 0.4186 MCERNVSSYHCLELFVGSIWCSMSSNSQPSGMQFRPVIPAQQGQPFVPMGSQQFGHAGQGNVGMPVVQSQQHQYSQPMQHLGPRPIQPGHPAPSLYVQTNRPLTSGPPHPQQTIPHLSNHMPGVAVSGAPPHSSYTFTPSYGQPQDNVNVNGFAQYQPSSQVHAPTVGQSWLSSASQSVAPVAQAQHPGIQSSSTTSTDAATTAPSQQSSSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSAEGRKYYYNKITQQSTWTIPEELKLAREQAQKAASQGMQSETSGTPIATDVSSAEISAAVNSVGSNASSTSTGVISSPVSVAPIPATSTPLQLVATTSSPTVVEPSPVVSMNSALTGVAGSLGGAANSHDSNMSSIVENQASHGVSTSVDGASLQDIEEAKRGMPVAGKINVTSIEEKANDDEPLVYANKLEAKNAFKALLESANVQSDWTWEQAMREIINDKRYTALKTLGERKQAFNEYLGQRKKLEAEERRMRQKRAREEFTKMLEECKELTSSTRWSKAVSMFENDERFKAVERARDREDLFDTYLMDLEKKERENAAEELNRNKAEYRKFLESCDFIKVSSQWRKVQDRLEDDERCSRLEKLDRLLIFQDYIRDLEKEDEEKKRTKKEQLRRSERKNRDAFRKLLEEHIDTGILTAKTRWREYCLKVKDLPQYQAVVSNTSGSTPRDLFEEVAEDLEKQYHEDKARIKDVIKLGKFVVVSTSAFEDFKAAVIEDDHPPISEINLKLIYEDFLEKAKEKEEKEAKKRQRLAEEFTELLHSFKDITASSTWEDCKPLIEETQEYRSIGDESVGREVFEEYITHLKGKAKEKERKREEEKAKKEREREEKEKRKEKEKDKERDREKERHKKDETDSENLDVTDNHGYKEDKKKEKDKERKHRKRHQSSTEDVDSEREEKEDSKKSRRHGSDRKKSRKHANSPESDNESRHKRHKRDRRDGSRKTGVYDDLEDGELGEDGEIRGH 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02180 1005 Gene3D FF domain 449 504 IPR036517 -
Bva06g02180 1005 ProSiteProfiles WW/rsp5/WWP domain profile. 207 240 IPR001202 GO:0005515
Bva06g02180 1005 ProSiteProfiles FF domain profile. 584 638 IPR002713 -
Bva06g02180 1005 MobiDBLite consensus disorder prediction 957 973 - -
Bva06g02180 1005 SUPERFAMILY FF domain 576 645 IPR036517 -
Bva06g02180 1005 Coils Coil 843 888 - -
Bva06g02180 1005 MobiDBLite consensus disorder prediction 179 217 - -
Bva06g02180 1005 SUPERFAMILY FF domain 441 503 IPR036517 -
Bva06g02180 1005 Pfam WW domain 254 279 IPR001202 GO:0005515
Bva06g02180 1005 Pfam WW domain 211 238 IPR001202 GO:0005515
Bva06g02180 1005 SUPERFAMILY WW domain 241 282 IPR036020 GO:0005515
Bva06g02180 1005 MobiDBLite consensus disorder prediction 845 1005 - -
Bva06g02180 1005 CDD WW 254 281 IPR001202 GO:0005515
Bva06g02180 1005 Coils Coil 497 517 - -
Bva06g02180 1005 MobiDBLite consensus disorder prediction 179 215 - -
Bva06g02180 1005 Coils Coil 710 737 - -
Bva06g02180 1005 PANTHER PRE-MRNA-PROCESSING PROTEIN PRP40 10 997 IPR039726 GO:0045292
Bva06g02180 1005 MobiDBLite consensus disorder prediction 924 948 - -
Bva06g02180 1005 SMART ww_5 208 240 IPR001202 GO:0005515
Bva06g02180 1005 SMART ww_5 249 281 IPR001202 GO:0005515
Bva06g02180 1005 SUPERFAMILY FF domain 651 726 IPR036517 -
Bva06g02180 1005 SMART FF_2 790 845 IPR002713 -
Bva06g02180 1005 SMART FF_2 584 638 IPR002713 -
Bva06g02180 1005 SMART FF_2 658 719 IPR002713 -
Bva06g02180 1005 SMART FF_2 516 571 IPR002713 -
Bva06g02180 1005 SMART FF_2 449 503 IPR002713 -
Bva06g02180 1005 Gene3D - 250 295 - -
Bva06g02180 1005 Gene3D - 206 249 - -
Bva06g02180 1005 Coils Coil 632 660 - -
Bva06g02180 1005 ProSiteProfiles WW/rsp5/WWP domain profile. 248 281 IPR001202 GO:0005515
Bva06g02180 1005 SUPERFAMILY FF domain 508 578 IPR036517 -
Bva06g02180 1005 PANTHER PRE-MRNA-PROCESSING PROTEIN 40B 10 997 - -
Bva06g02180 1005 MobiDBLite consensus disorder prediction 131 151 - -
Bva06g02180 1005 CDD WW 211 240 IPR001202 GO:0005515
Bva06g02180 1005 Gene3D FF domain 785 858 IPR036517 -
Bva06g02180 1005 ProSiteProfiles FF domain profile. 656 719 IPR002713 -
Bva06g02180 1005 SUPERFAMILY WW domain 212 246 IPR036020 GO:0005515
Bva06g02180 1005 ProSitePatterns WW/rsp5/WWP domain signature. 254 279 IPR001202 GO:0005515
Bva06g02180 1005 ProSiteProfiles FF domain profile. 449 503 IPR002713 -
Bva06g02180 1005 Coils Coil 772 800 - -
Bva06g02180 1005 ProSitePatterns WW/rsp5/WWP domain signature. 213 238 IPR001202 GO:0005515
Bva06g02180 1005 ProSiteProfiles FF domain profile. 790 845 IPR002713 -
Bva06g02180 1005 MobiDBLite consensus disorder prediction 845 917 - -
Bva06g02180 1005 Coils Coil 570 592 - -
Bva06g02180 1005 Pfam FF domain 451 500 IPR002713 -
Bva06g02180 1005 Pfam FF domain 586 635 IPR002713 -
Bva06g02180 1005 Pfam FF domain 795 842 IPR002713 -
Bva06g02180 1005 Pfam FF domain 518 568 IPR002713 -
Bva06g02180 1005 Pfam FF domain 660 715 IPR002713 -
Bva06g02180 1005 ProSiteProfiles FF domain profile. 516 571 IPR002713 -
Bva06g02180 1005 MobiDBLite consensus disorder prediction 119 151 - -
Bva06g02180 1005 Gene3D FF domain 506 579 IPR036517 -
Bva06g02180 1005 Gene3D FF domain 580 648 IPR036517 -
Bva06g02180 1005 Gene3D FF domain 649 730 IPR036517 -
Bva06g02180 1005 SUPERFAMILY FF domain 783 851 IPR036517 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02180 Bva-Chr6 14295639 14306829 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02180 K12821 - gmx:100806019 1221.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02180 06 14295639 14306829 Bva06g02180 06 14295639 14306829 ECH