Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02168 ATGCTCGAACCTCACAGGATTAGCTCCATAGATTGGAGGCCTTCACCAGTAGTATCCCTAGCCACCAGCATCGACGGGTTACAGGTTGCTGCAGCTCGCGAAGATGCGTCCTTGGAGGTTTGGTTTGTCTCTCCTGGTTCTGTCGGTTGGCATTGTCAGCTGACTATTCATGGAGATCCTAATACACGAGTTTCCTCACTTACTTGGTGCCCCGGTGGTTCAAGTGGCATGCCTTGCGGTCGATTATTCTCATCTAACATAGATGGGTCAGTTTCTAAGTGGGATCTTTTCCACCTGAAGCAGAAGATCGCGCTTAGTTCAGTTGGTGTATCAATCTGGCAAATGGCCGTGGAACCGTTTAACAGTGACTTAATTAGTACCGAACAAAAGCCTGAGCATACAGGGAATGGATATATGAGctataaattcaataatttggATGAGCATGAAAGCAGTGAAAGTGACGAAGATTCTGACTCATATGACCGTGTTAAGCAATCTGTTGAGTATCCACCACGTGTAGCAATTGGTTGTGATGATGGATGTGTACGAATATATGGCATCTCTGACTCTGATGAATTTGTATACTTAAAATCCTTGCCTAGGGTCAGTGGACGGGTTTTAAGCGTGACTTGGAGTACAGatgcaaaattcatatattcaGGAAGCAGTGACGGGTTAATAAGATGCTGGGATGCTAAACAAGGTCATGAAATTTATAGAATTACTGCCGGACTTGGAGGTTTGGGCGGCAAACATGATCTTTGCATATGGTCATTACTTTCCTTAAGGTCTGGGACACTTGTTAGTGCAGACAGCAGTGGTAGCGTCCAGTTTTGGGACAGCCAGCATGGAACTCTCTTGCAAGCACATTCATTACACAAGGGAGATGTAAACGCTCTGGCAGCAGCACCTGGTCATAATAGAGTGTTCTCAGCTGGCTCTGATGGCCAGgtTATTCTTTATAAGCTCTCTAATGAGTCAGTGTCTTCAGACAATAACAAGTCTTCGATGATAATGAAAAAATGGATCTATGTTGGTTATGTAAGGGCTCATACACACGATGTCAGGGCTTTGACTGTGGCAGCGCCGATAAATCGAGAAGATCCCTTACCTGATGAGAAGGTTAAAAGAGTACGTCGTGAAGAAAAGCCAATTGATTTTAGTTACTGTAAATGGGCCCATTTGGGCGTTCCCATGCTTATCTCTGCAGGCGATGACACAAAACTCTTTGCCTATTCAGTGAAGGAGTTTACTAAGTTCTCTCCTCATGATATCTGTCCTGCGCCTCAAAGAACACCTATTCAACTAGTGCCTAATAGTGCCTTTAATCAATTGCCAGTGCTTTTAATTCAGACTTCCAGTCACTTGGATATTCTTACTATACGAACAAAAAATGGTGTCTTTCCTGATGTTTCCCGTCGCACAGCTGGGGGTCTTACAACAACTGATCTGCTTGCTCGAGTTAATAGTAAGGCATCTCGGAAGATAATTTGCAGCACCATTGCTAATTCTGGTGTGTTTTTTGCTTACTCTGATCATGTGAAGCCCAGTCTATTTGAATTGAAGTGTAAAGATGGGAAAAGTGCATGGAGTATTAGTAAAAGGAAACTTCCACTGCTACCATTTGCTCATTCTAtgatttttacttttgattcCTCTCGGCTGATAGTTGCTGGACACGATAGAAGGATATATGTTGTGGATGTGGACAGTTTAGAACTGTTGCACACCTTTACACCTTGTCGGGAGTTGTGTAATGAGGAATCACCACCTACTGAACCTCCAATAACAAAAATGTTTACTAGTTCTGATAGCCAATGGTTGACGGCTGTAAGCTGCTTTggagatatatatgtattcaaTCTGGAGATACAAAGGCAGCATTGGTTTGTTTCAAGATTAGACGGTGCCTCTGTTACTGCTGGAGGATTTCCACCCCAAAACAACAATATACTTCTTATTACAACTTCCTCAAATCAAGTATATGCATTTGATGTGGAGGCCAAACAGTTGGGAGAATGGTCAATGCGGCACACTCTTCTTCTTCCGAAGAGATACCAGGAATTTCCTGGCGAAGTTATTGGTCTCTCATTCCCTCCCTCCTCAAGTGCATCTTCGGTTGTTGTTTACAGTGCCAGGGCAATGTGCTTGATTGACTTTGGGTTGCCAGTGGAGCAAGATGATGGTGAAGTGCTAAATGCTCAAGATTCAAAGGCCAGAACTTCACAAAATTCTTTCAAGGGGAAACATAAACGTAGAAagaactttgaattttttgcatTCAGAGATCCTGTTTTATATTCTGCGTATCTTTCAAAAAGTTCCTTCTTATTAATAGATAAGCCATGGCTAGAAGTAGTTAAAAGTTTAGAAGCCCCGCCTGTTCACAGGCATATTTTTGGTACATA 2411 0.4156 MLEPHRISSIDWRPSPVVSLATSIDGLQVAAAREDASLEVWFVSPGSVGWHCQLTIHGDPNTRVSSLTWCPGGSSGMPCGRLFSSNIDGSVSKWDLFHLKQKIALSSVGVSIWQMAVEPFNSDLISTEQKPEHTGNGYMSYKFNNLDEHESSESDEDSDSYDRVKQSVEYPPRVAIGCDDGCVRIYGISDSDEFVYLKSLPRVSGRVLSVTWSTDAKFIYSGSSDGLIRCWDAKQGHEIYRITAGLGGLGGKHDLCIWSLLSLRSGTLVSADSSGSVQFWDSQHGTLLQAHSLHKGDVNALAAAPGHNRVFSAGSDGQVILYKLSNESVSSDNNKSSMIMKKWIYVGYVRAHTHDVRALTVAAPINREDPLPDEKVKRVRREEKPIDFSYCKWAHLGVPMLISAGDDTKLFAYSVKEFTKFSPHDICPAPQRTPIQLVPNSAFNQLPVLLIQTSSHLDILTIRTKNGVFPDVSRRTAGGLTTTDLLARVNSKASRKIICSTIANSGVFFAYSDHVKPSLFELKCKDGKSAWSISKRKLPLLPFAHSMIFTFDSSRLIVAGHDRRIYVVDVDSLELLHTFTPCRELCNEESPPTEPPITKMFTSSDSQWLTAVSCFGDIYVFNLEIQRQHWFVSRLDGASVTAGGFPPQNNNILLITTSSNQVYAFDVEAKQLGEWSMRHTLLLPKRYQEFPGEVIGLSFPPSSSASSVVVYSARAMCLIDFGLPVEQDDGEVLNAQDSKARTSQNSFKGKHKRRKNFEFFAFRDPVLYSAYLSKSSFLLIDKPWLEVVKSLEAPPVHRHIFGT 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02168 803 SMART WD40_4 49 95 IPR001680 GO:0005515
Bva06g02168 803 SMART WD40_4 193 232 IPR001680 GO:0005515
Bva06g02168 803 SMART WD40_4 534 569 IPR001680 GO:0005515
Bva06g02168 803 SMART WD40_4 284 323 IPR001680 GO:0005515
Bva06g02168 803 SMART WD40_4 3 42 IPR001680 GO:0005515
Bva06g02168 803 SMART WD40_4 98 187 IPR001680 GO:0005515
Bva06g02168 803 SMART WD40_4 235 281 IPR001680 GO:0005515
Bva06g02168 803 Gene3D - 503 718 IPR015943 GO:0005515
Bva06g02168 803 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 14 625 IPR011047 -
Bva06g02168 803 ProSiteProfiles Trp-Asp (WD) repeats profile. 291 332 IPR001680 GO:0005515
Bva06g02168 803 Gene3D - 3 154 IPR015943 GO:0005515
Bva06g02168 803 Pfam WD domain, G-beta repeat 207 232 IPR001680 GO:0005515
Bva06g02168 803 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 1 803 IPR044622 GO:0010073|GO:0035266
Bva06g02168 803 ProSiteProfiles Trp-Asp (WD) repeats profile. 200 241 IPR001680 GO:0005515
Bva06g02168 803 Gene3D - 155 428 IPR015943 GO:0005515
Bva06g02168 803 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 200 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02168 Bva-Chr6 14244541 14250172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02168 28 349 Acyl Lipid Metabolism Gene Families AT3G18860 22.222 3.52e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02168 K14548 - jre:109001109 1189.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02168 06 14244541 14250172 Bva06g02168 06 14244541 14250172 ECH