Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02156 ATGTGGAAGCAGATCAGAGACAGAGAAGCGGCAAAAATCCGCCCAGATTCATTTGCTAATCGCATCAAGTCCAATCGCATTGCTCAGCTTCAACTGTCCAATTATAAAGATATTGCAACCCCTCATAAAGGAGCCATAAACTCCCTTCAGATTGATTTGACAGAGGGAAGATACTTGTTATCTGCTGCGTCGGATGCATCAGTAGCTGTTTATGATGTTCAACGGGCCACAGACTATGATGCCGGTGGTCTCATATCTAGACACAAGTGCATATTTGTTGTTGACAAGCAACATGAACTTGGGCACAAGTACTCCATATCCTCGGCTATATGGTATCCTGTTGACACAGGTCTATTTGTCACTGGTTCATATGATCATCATATAAATGTTTGGGATACAAATACCACCCAGgtGGTTATGAATTTCAAAATGCCTGGAAAGGTCTATAGAACTGCCATGTCCTCGTTGGCTACATCTCACATGCTGATCGCCGCGGGAACTGAGGACGTCCAGGTTCGCCTTTGTGATATTGCTTCAGGGGCCTTCGCTCACACGTTGTCTGGTCACCGCGATGGAGTAATGACCGCGGAATGGTCTACTTCAAGTGAATGGGTCTTAATAACTGGGGGATGTGATGGTGCAATACGTTTTTGGGACATCAGACGTGCTGGCTGTTTCCTAGTGTTAGATCAGTCCAGGACACAGCTTGGAACACGCCCACCTATACTTAAACGCTCCATGATGACTAAgGAGACGAAATCACGGGCTGCACAGAGGAAACTTGCAAATGGTAGTGGCAGCAAACATTCCCCAATAGGTAGAGTCCCAGCTAAGGGGCATGCGAAACAGAGATTGCATCCGGGGTTGCTGTCTTCTCAGGATCGTGCTACAGCTCATTACGGTGCTGTGACAGGATTAAAAATAACTGAAGACAGCATGTATCTCTTAAGCGCAGGATCTGATTCGAGATTGAGGTTGTGGGATATTGAATCTGGCTGTGACACGCTAGTGAACTTTGAAACGTTGCGCCTACAAAGCAGCAAGCCTATTCAATTAGCCACCACTCCTGATTCAGCCTTTGTTTTTGTTCCATGCATGAGATCTGTCAAAGTGTTTGACATGTGGTCTGGGAACACCCGTACAACATTTCGTGGGCATTATGAATGTGTGAACTCTTGCTGGTTTAGTGTAGATGATCAGGAATTATACACAGGTGGAAATGATAGACAAATTCTTGTCTGGTCACCAGCTAGATTGATTACGGATGAATTGAATGAAGGACCTGCTGAGGATCAGGACAACTGGAGCAACTG 1313 0.4554 MWKQIRDREAAKIRPDSFANRIKSNRIAQLQLSNYKDIATPHKGAINSLQIDLTEGRYLLSAASDASVAVYDVQRATDYDAGGLISRHKCIFVVDKQHELGHKYSISSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVMNFKMPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTAEWSTSSEWVLITGGCDGAIRFWDIRRAGCFLVLDQSRTQLGTRPPILKRSMMTKETKSRAAQRKLANGSGSKHSPIGRVPAKGHAKQRLHPGLLSSQDRATAHYGAVTGLKITEDSMYLLSAGSDSRLRLWDIESGCDTLVNFETLRLQSSKPIQLATTPDSAFVFVPCMRSVKVFDMWSGNTRTTFRGHYECVNSCWFSVDDQELYTGGNDRQILVWSPARLITDELNEGPAEDQDNWSN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02156 437 PRINTS G protein beta WD-40 repeat signature 206 220 IPR020472 -
Bva06g02156 437 PRINTS G protein beta WD-40 repeat signature 119 133 IPR020472 -
Bva06g02156 437 PRINTS G protein beta WD-40 repeat signature 315 329 IPR020472 -
Bva06g02156 437 PANTHER DNA EXCISION REPAIR PROTEIN ERCC-8 1 436 IPR042238 GO:0006283
Bva06g02156 437 ProSitePatterns Trp-Asp (WD) repeats signature. 206 220 IPR019775 -
Bva06g02156 437 MobiDBLite consensus disorder prediction 248 280 - -
Bva06g02156 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 296 337 IPR001680 GO:0005515
Bva06g02156 437 Pfam WD domain, G-beta repeat 378 415 IPR001680 GO:0005515
Bva06g02156 437 Pfam WD domain, G-beta repeat 184 219 IPR001680 GO:0005515
Bva06g02156 437 Pfam WD domain, G-beta repeat 297 328 IPR001680 GO:0005515
Bva06g02156 437 Pfam WD domain, G-beta repeat 96 132 IPR001680 GO:0005515
Bva06g02156 437 SUPERFAMILY WD40 repeat-like 40 416 IPR036322 GO:0005515
Bva06g02156 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 99 141 IPR001680 GO:0005515
Bva06g02156 437 Gene3D - 1 418 IPR015943 GO:0005515
Bva06g02156 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 383 415 IPR001680 GO:0005515
Bva06g02156 437 SMART WD40_4 87 132 IPR001680 GO:0005515
Bva06g02156 437 SMART WD40_4 32 72 IPR001680 GO:0005515
Bva06g02156 437 SMART WD40_4 286 328 IPR001680 GO:0005515
Bva06g02156 437 SMART WD40_4 376 415 IPR001680 GO:0005515
Bva06g02156 437 SMART WD40_4 179 219 IPR001680 GO:0005515
Bva06g02156 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 39 81 IPR001680 GO:0005515
Bva06g02156 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 186 221 IPR001680 GO:0005515
Bva06g02156 437 ProSitePatterns Trp-Asp (WD) repeats signature. 315 329 IPR019775 -
Bva06g02156 437 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 383 415 - -
Bva06g02156 437 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 186 221 - -
Bva06g02156 437 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 296 332 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02156 118 226 Miscellaneous Gene Families AT5G08390 26.606 5.29e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02156 K10570 - gmx:100815581 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02156 06 14197730 14201242 Bva06g02156 06 14197730 14201242 ECH