Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02148 ATGTCGAATCGATGCTCACAGTATAGGCAAGACGGTAACAAAGTTTTTGCCAAAACACAGAAGAAATTTGTCCCAAAAAATCAGAATTCAAATCCTAATAAAGGAACAAATCCAACTCTCTCAAGCTCCCTCAGACAATCGTTTTCTACGAGGCAATCGGATGCTTCAACTGGGAGCAGTCGTTCCGTTTCTGCATCGTCGGGTGGGGCTCAAGTGGTGGGCGACAATGGAGAATGGGTATCAAATATAACTCGGGGTGggaatttcttaaattactTGCCACAGGATGAGGCAGTGGCAGCTGGGCTTGGCGCTGTGGAAGGAGGATTGGATCCCTTGGAATCTCAACGAATTGTCGATGTTCTGAATAGAGAGCTGTCTCGGTTGCTCAAGTTGAAACCAAGGGAATTTTGGAGGGAAGTGGCTAGTGACGCCTCATTACATGAGTTTCTGGACAGCTTCCTACAATTTAGGAGCAGATGGTATGACTTCCCTCACCGTGGAGCCAAAGAAATAGTAGCTGGGGTTATTGTGGGCGAGCTTGATTTAAGTCGGAGAGTTTTCATGGTATTGTATCGCATTTCTTCCAATAAAGATCCTGGTGCTCGTGTTTCTGATAGCCTCAGTCTGAGAGACCACGGAGTTCTCTTGCAGGAGAAGCAGTTGCTTGACTTGCCAAAGTTGTTAGATATATGTGCCATATATGGtcatgaaaatgaagagttGACCAGATTACTGGTCATAAATGCTTTGAAGGCTCAGCCTTGGCTCCATGATAATCTGACTGCAGTAATATCACATTTTCTAGGAAttgtccacaccatggaagAACGTTGTAGGGCATCATTAGAgATCTTATTTAACTCTGGAAAACCTGATATGCACAATACAGCTCAACTTCAAGCTGATCTTCTGGAGGTGATGGACTTTATTAATAATGCAACTGTATCAATAGATGCTTTTGTTAGTGCCTATAAACCAGCAGCTATAGTCTTTTCTTGCCCCGTTGAAATGAGTTATGGAAATGAGGAATTGTTAAGCCTCCTTGCCAGATCGCACGATTCACTTATTCCATCCTTGCAAAAGGGCATCCGTATTATCTTTGCTGATGGACAAGATGGAAGAGTATCTAACATTATTGCTAGTTTGAAGATGCTACGGATGAGATTGGTGAAGTTCGGTTGGCACTTACTGCATTTTTGCTATCTAAGTGATGAAGTGTTCAGAGATAGCATGCCTCTTCAAGCTGCCACAAAGATGTTTCCTGCTAATGTGGAGGACCCAGTTATCAGAGCAGATATTCTGGTTCAGACATTTATGGAGATCAATGCAGTTTCACTTTGTTTTCAGGAAagccaacaaaaagaaacattcCTTCAACATGTTGAAAAGAATCACAATATATTAAGCAGACTTAAAAGCTTACGAGATAATGGATGGATATTCATTGATGATGAACAGATCCAGCATATATCTGGGATTGTGTCTTCTGCCGAAGAGAATCATAAAGAACTAAACTCTGAGATAACCCCTCCGATGAGCAAAATTCTGCAGATGGATGAAGATGCTGCAATTATAGAGTCCAAAATGAGTCAAATAAAGGACCTATTCCCTGATTATGGTAAAGCGTTTTTACGTGCATGTCTTGAAGTCTACGACCATAGTCCAGAAGTGGTTATTCAGAGAATTTTAGAGGGAACGCTCCATGAAGACCTTCAAGGCTTGGACACAACATTAGAGACACTGCCACCAGTCCAGCCTACCACTGTGGGGAGGAATGATAAAGGAAAAGGTATTTTAGTTGTTGACTCTATGTCAGTGTCCACGAATAATGCGATAGCCGTCGGCAAAAAGCAACAGAAAGAGGAGGAGCCTTTAATCTCGTCCTCCTCTTCACTTGGAAAATTTGTGAGAAAATCTAAAGCTGACTTATCTCATCAAAGTATTCTGGATaaaaaggatgaaaaagaTACATTAAGAACTGCTGCTCTAGTTTCACAATATGAATACGAAGATGAATACGACGACTACTTTGATGACTTAGGTCTAAGTGTTGCTGACTCGGgagtagaagaaaatgagacatTGGATGacgaaagaaatagagaagcGGGGAAACCATGGGCAACGGAAACTGGAAATTCTGTTCAAAATGCCCCAAATTCGAAATGGGGCTGTAGGAAAAAGCCACAGTACTATGTCAAGGATGGTAAGAATTACAGCTACAACGTCGCAGGCGCAATAGCAGTTGCAAATTCTGATGAAGCTTCACTAGTTTCTCAAGCGCAGGAAGAATTAATATATGGTCTTGGACGTGGTGGCAACTTTCCTGCTGGTGCAGTAAAGAAGCTGACAGAATCCTATGAGGAGGATGATAAGCAATTCCGTGTTTCTGAAGCCGAAGGGAAACAGATTTTGGGGAATCTTGGAGGCAGCCGGGGAAGGAAAGGAAGGGGAAAGTCAATTGAACCTCGCGAGCAACAAGGAAATCAATCCGATGTATCTGATGCGGAAAGAGGAgggaatattttaaattacagaGGGAGAGGAAGAAGGGGAGGTGGAAGGAGCAATCATTACAGGAAGGACCAAGCCATGAAGAAGCATTTCTCTGGTTTGGGTGGGTATTA 2630 0.4057 MSNRCSQYRQDGNKVFAKTQKKFVPKNQNSNPNKGTNPTLSSSLRQSFSTRQSDASTGSSRSVSASSGGAQVVGDNGEWVSNITRGGNFLNYLPQDEAVAAGLGAVEGGLDPLESQRIVDVLNRELSRLLKLKPREFWREVASDASLHEFLDSFLQFRSRWYDFPHRGAKEIVAGVIVGELDLSRRVFMVLYRISSNKDPGARVSDSLSLRDHGVLLQEKQLLDLPKLLDICAIYGHENEELTRLLVINALKAQPWLHDNLTAVISHFLGIVHTMEERCRASLEILFNSGKPDMHNTAQLQADLLEVMDFINNATVSIDAFVSAYKPAAIVFSCPVEMSYGNEELLSLLARSHDSLIPSLQKGIRIIFADGQDGRVSNIIASLKMLRMRLVKFGWHLLHFCYLSDEVFRDSMPLQAATKMFPANVEDPVIRADILVQTFMEINAVSLCFQESQQKETFLQHVEKNHNILSRLKSLRDNGWIFIDDEQIQHISGIVSSAEENHKELNSEITPPMSKILQMDEDAAIIESKMSQIKDLFPDYGKAFLRACLEVYDHSPEVVIQRILEGTLHEDLQGLDTTLETLPPVQPTTVGRNDKGKGILVVDSMSVSTNNAIAVGKKQQKEEEPLISSSSSLGKFVRKSKADLSHQSILDKKDEKDTLRTAALVSQYEYEDEYDDYFDDLGLSVADSGVEENETLDDERNREAGKPWATETGNSVQNAPNSKWGCRKKPQYYVKDGKNYSYNVAGAIAVANSDEASLVSQAQEELIYGLGRGGNFPAGAVKKLTESYEEDDKQFRVSEAEGKQILGNLGGSRGRKGRGKSIEPREQQGNQSDVSDAERGGNILNYRGRGRRGGGRSNHYRKDQAMKKHFSGLGGY 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02148 876 SUPERFAMILY UBA-like 526 582 IPR009060 GO:0005515
Bva06g02148 876 MobiDBLite consensus disorder prediction 708 722 - -
Bva06g02148 876 MobiDBLite consensus disorder prediction 691 722 - -
Bva06g02148 876 MobiDBLite consensus disorder prediction 824 838 - -
Bva06g02148 876 MobiDBLite consensus disorder prediction 1 70 - -
Bva06g02148 876 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 13 874 - -
Bva06g02148 876 SMART cue_7 525 567 IPR003892 GO:0043130
Bva06g02148 876 MobiDBLite consensus disorder prediction 22 70 - -
Bva06g02148 876 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 13 874 - -
Bva06g02148 876 Gene3D - 525 568 - -
Bva06g02148 876 ProSiteProfiles CUE domain profile. 525 568 IPR003892 GO:0043130
Bva06g02148 876 Pfam CUE domain 527 567 IPR003892 GO:0043130
Bva06g02148 876 CDD CUE_ASCC2 527 566 IPR041800 -
Bva06g02148 876 MobiDBLite consensus disorder prediction 792 876 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02148 Bva-Chr6 14149663 14157059 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02148 K18667 - gmx:100778129 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02148 06 14149663 14157059 Bva06g02148 06 14149663 14157059 ECH