Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02133 ATGAAGCTCGTCTTCGCAACTGTTCTCCTTGTCTGCCTTGTCCTCGGCTCCTCTATGTTTGAGGCCACAATGGCTGCTCCTCCTTTCTGTAACTCCAAGTGCAAGGCGAGGTGCTCCAAAGCTGGAATGCAAGACAGGTGCTTGAGGTTTTGTGGGATCTGCTGTGATAAGTGCAAGTGTGTGCCATCTGGAACTTACGGGAACAAGCACGAGTGCCCTTGCTACAGGGATCTCAAGAACGGCAAGGGAAAGCCAAAATGCCCTTA 266 0.515 MKLVFATVLLVCLVLGSSMFEATMAAPPFCNSKCKARCSKAGMQDRCLRFCGICCDKCKCVPSGTYGNKHECPCYRDLKNGKGKPKCP 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02133 88 PANTHER GIBBERELLIN REGULATED PROTEIN 1 88 - -
Bva06g02133 88 Pfam Gibberellin regulated protein 29 88 IPR003854 -
Bva06g02133 88 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02133 Bva-Chr6 14084329 14084722 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02133 - - pop:18104813 162.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02133 06 14084329 14084722 Bva13g00360 13 1685680 1686044 ECH
Bva06g02133 06 14084329 14084722 Bva14g00445 14 2166870 2167210 ECH
Bva06g02133 06 14084329 14084722 Bva06g02133 06 14084329 14084722 ECH